RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZFHX4Q86UP3 3567 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 POLEQ07864 2286 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATMQ13315 3056 aa3□□□□□ -1.93
HMGB3P20-201ENST00000417997 TET2Q6N021 2002 aaPredicted RBP3□□□□□ -1.93
HMGB3P20-201ENST00000417997 PLCE1Q9P212 2302 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 DMXL2Q8TDJ6 3036 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV4-30-2A0A087WSY4 118 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 TRAV3A0A0B4J244 114 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 TRAV40A0A0B4J280 105 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV4-61A0A0C4DH41 118 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 SMCO3A2RU48 225 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF705EA8MWA4 302 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ODF3BA8MYP8 253 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OOSP1A8MZH6 123 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 UPK2O00526 184 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OPN1MWP04001 364 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGKV1-16P04430 117 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 IFNA4P05014 189 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OPN1MW2P0DN77 364 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OPN1MW3P0DN78 364 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 FGF7P21781 194 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 S100A1P23297 94 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 NPY1RP25929 384 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATP6V0CP27449 155 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 PAX9P55771 341 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 RAB2AP61019 212 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 HSPE1P61604 102 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 LMO4P61968 165 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 RPL8P62917 257 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ERHP84090 104 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRCDQ00LT1 54 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 AKR1C1Q04828 323 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF616Q08AN1 781 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 UBE2V1Q13404 147 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 DIAPH2-AS1Q14236 149 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 MMDQ15546 238 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 TNXAQ16473 311 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATP6V1FQ16864 119 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 AKR1C8PQ5T2L2 129 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 MINOS1Q5TGZ0 78 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM182Q6ZP80 229 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 Q6ZRG5 221 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF429Q86V71 674 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 MMD2Q8IY49 270 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 PUSL1Q8N0Z8 303 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 STPG2Q8N412 459 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 C11orf42Q8N5U0 333 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 UBAC2Q8NBM4 344 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR1L8Q8NGR8 309 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR5B3Q8NH48 314 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR52E5Q8NH55 327 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM167AQ8TBQ9 72 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 NRGNQ92686 78 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ST6GALNAC6Q969X2 333 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 GNPNAT1Q96EK6 184 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 CXorf58Q96LI9 332 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 LINC00479Q96M42 142 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR4C12Q96R67 309 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 OPRPNQ99935 248 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 GINS3Q9BRX5 216 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 SIRPDQ9H106 197 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 C11orf1Q9H5F2 150 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 CYTL1Q9NRR1 136 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 UQCC1Q9NVA1 299 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 DPM3Q9P2X0 92 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 METTL1Q9UBP6 276 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF257Q9Y2Q1 563 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 HILPDAQ9Y5L2 63 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 MINOS1-NBL1R4GNA1 71 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 NCOR2Q9Y618 2525 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 MAP1BP46821 2468 aaKnown RBP2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 CEP295Q9C0D2 2601 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 ASPMQ8IZT6 3477 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 PIEZO2Q9H5I5 2752 aa2.99□□□□□ -1.93
HMGB3P20-201ENST00000417997 BOD1L1Q8NFC6 3051 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 HIVEP3Q5T1R4 2406 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 LINC00862A6NCI5 91 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 B4DSR2 109 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 UMAD1C9J7I0 102 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 C17orf112F2Z3M2 114 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 RNASEK-C17orf49H0YIS7 233 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TEX46H3BTG2 121 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 I3L521 148 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 NPFFO15130 113 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 NBR2O15453 112 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 VENTXO95231 258 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 CNIH1O95406 144 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM50AO95807 157 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 MOSP00540 346 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 MSMBP08118 114 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 NMBP08949 121 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SEC11BP0C7V7 166 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM11P17152 192 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 CD1BP29016 333 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 BRS3P32247 399 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms