RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 IGKV1-13P0DP09 117 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 CRISP2P16562 243 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 PSMB2P49721 201 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 CCL23P55773 120 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LMO4P61968 165 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 PMCHL1Q16048 86 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00242Q5T6M2 205 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 C11orf87Q6NUJ2 197 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 DPPA3Q6W0C5 159 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 FAM57BQ71RH2 274 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 H2AFVQ71UI9 128 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00305Q7Z4B0 112 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 GTSCR1Q86UQ5 136 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 RNF182Q8N6D2 247 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF709Q8N972 641 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 C11orf72Q8NBR9 251 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF114Q8NC26 417 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SMRP1Q8NCR6 262 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 OR10AG1Q8NH19 301 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 RITA1Q96K30 269 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 KCNS1Q96KK3 526 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SPACA5Q96QH8 159 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 VGLL1Q99990 258 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 PYGO2Q9BRQ0 406 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 FAM60AQ9NP50 221 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 TXNL4BQ9NX01 149 aaKnown RBP2.8□□□□□ -1.96
SF3B1-203ENST00000414174 TAAR3PQ9P1P4 343 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00527Q9UJ94 153 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 COQ4Q9Y3A0 265 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SPCS1Q9Y6A9 102 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 WIZO95785 1651 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RAPGEF6Q8TEU7 1601 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 LAMC3Q9Y6N6 1575 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 NKTRP30414 1462 aaKnown RBP2.79□□□□□ -1.96
SF3B1-203ENST00000414174 C1orf167Q5SNV9 1468 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TCRBV5S1A1TA0A578 114 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 SCRG1O75711 98 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RBP4P02753 201 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 CXCL1P09341 107 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF286BP0CG31 522 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 FABP2P12104 132 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 HLA-DRB4P13762 266 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 CXCL5P42830 114 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 PSMB3P49720 205 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 NDUFA8P51970 172 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TAS2R45P59539 299 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TFF2Q03403 129 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 LGALS9BQ3B8N2 356 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 ABCA11PQ4W5N1 156 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 Q6ZS49 121 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RFLNAQ6ZTI6 216 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 COMMD6Q7Z4G1 85 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 MKXQ8IYA7 352 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RPP25LQ8N5L8 163 aaKnown RBP2.79□□□□□ -1.96
SF3B1-203ENST00000414174 DRAM1Q8N682 238 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TMEM75Q8N9X5 138 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 APCDD1LQ8NCL9 501 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 OR10P1Q8NGE3 313 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 C18orf32Q8TCD1 76 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF721Q8TF20 911 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 TMEM158Q8WZ71 300 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 NABP1Q96AH0 204 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 FXYD5Q96DB9 178 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 C18orf15Q96N68 181 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 PMCHL2Q9BQD1 86 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 C20orf78Q9BR46 151 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 C11orf68Q9H3H3 251 aaKnown RBP2.79□□□□□ -1.96
SF3B1-203ENST00000414174 OCIAD1Q9NX40 245 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 DNAJC15Q9Y5T4 150 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 HLA-DRB4X5D2U9 266 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 MYH7BA7E2Y1 1941 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 ITSN2Q9NZM3 1697 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RIMBP3CA6NJZ7 1639 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RIMBP3BA6NNM3 1639 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 RIMBP3Q9UFD9 1639 aa2.79□□□□□ -1.96
SF3B1-203ENST00000414174 GLI2P10070 1586 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 CFAP74Q9C0B2 1584 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 UGGT1Q9NYU2 1555 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 ADAMTS13Q76LX8 1427 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 SCN4AP35499 1836 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 TRAV19A0A0A6YYK7 116 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 TRGV5A0A0B4J1U4 118 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 SNRPGP15A8MWD9 76 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 H3BT86 120 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 UBE2L6O14933 153 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PSPHP1O15172 72 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 SSSCA1O60232 199 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 TCRAP04437 139 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 SLC25A4P12235 298 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 COX7CP15954 63 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 GNLYP22749 145 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 CD70P32970 193 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 TAS2R19P59542 299 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 296.1 ms