RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RBM7Q9Y580 266 aaKnown RBP2.71□□□□□ -1.98
BRCA1-204ENST00000412061 RFX7Q2KHR2 1363 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 BORCS7-ASMTA0A0B4J1R7 106 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM189A5PLL7 270 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 TLCD2A6NGC4 264 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 GGTLC3B5MD39 225 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 H7BYZ3 331 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 BCL2P10415 239 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 CCL5P13501 91 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 PSMB8P28062 276 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 SRP14P37108 136 aaKnown RBP2.7□□□□□ -1.98
BRCA1-204ENST00000412061 XCL1P47992 114 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 FOXA1P55317 472 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 ZNF117Q03924 483 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 KISS1Q15726 138 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 RTL8BQ17RB0 113 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 BCL2L15Q5TBC7 163 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 Q6P435 159 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 TRAPPC6BQ86SZ2 158 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 WFDC5Q8TCV5 224 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 ISOC1Q96CN7 298 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 COPZ2Q9P299 210 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 HEY1Q9Y5J3 304 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 SOGA1O94964 1423 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 CD109Q6YHK3 1445 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 LTBP4Q8N2S1 1624 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 NUP210Q8TEM1 1887 aaPredicted RBP2.7□□□□□ -1.98
BRCA1-204ENST00000412061 NYNRINQ9P2P1 1898 aaKnown RBP2.7□□□□□ -1.98
BRCA1-204ENST00000412061 BICRAQ9NZM4 1560 aa2.7□□□□□ -1.98
BRCA1-204ENST00000412061 ERCC6Q03468 1493 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 CAMSAP2Q08AD1 1489 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 BCL9O00512 1426 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 A0A0D9SEW6 157 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 A0A1W2PQD3 144 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 GABARAPH6UMI1 98 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 OR2T1O43869 369 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 DBIP07108 87 aaKnown RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 ZNF22P17026 224 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 EIF5AP63241 154 aaKnown RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 ZNF141Q15928 474 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 MIR17HGQ75NE6 70 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 IFT20Q8IY31 132 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 HIST3H2BBQ8N257 126 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 RPP25LQ8N5L8 163 aaKnown RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 Q8NAQ8 132 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM229BQ8NBD8 167 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 OR51T1Q8NGJ9 327 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 OR8D4Q8NGM9 314 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 PPTC7Q8NI37 304 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 IMMP2LQ96T52 175 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 SLC25A21Q9BQT8 299 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-204ENST00000412061 SCRT1Q9BWW7 348 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM133Q9H2Q1 129 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 OSTCQ9NRP0 149 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 NAT8Q9UHE5 227 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 HSPB8Q9UJY1 196 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 TOPBP1Q92547 1522 aa2.69□□□□□ -1.98
BRCA1-204ENST00000412061 A0A087X0T9 212 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 IGHV3-15A0A0B4J1V0 119 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TRAV40A0A0B4J280 105 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 ODAMA1E959 279 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 RFPL4AA6NLU0 287 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM212A6NML5 194 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 RFPL4AL1F8VTS6 287 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 H3BT86 120 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 RPL36A-HNRNPH2H7BZ11 118 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM256-PLSCR3K7ERE1 68 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 M0R378 163 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 GGCTO75223 188 aaKnown RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 IGKV1-16P04430 117 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 FKBP2P26885 142 aaKnown RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 CMPK1P30085 196 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 EIF2B2P49770 351 aaKnown RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 UBE2BP63146 152 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 SPCS2Q15005 226 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM136Q6ZRR5 245 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 C10orf126Q8N4M7 172 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 C1orf64Q8NEQ6 169 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TEX37Q96LM6 180 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 SCGB3A1Q96QR1 104 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 VPS25Q9BRG1 176 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 GINS4Q9BRT9 223 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 YIPF3Q9GZM5 350 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 DUSP21Q9H596 190 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 KLK12Q9UKR0 248 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 PTPRSQ13332 1948 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OBSL1O75147 1896 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 A0A0J9YW62 118 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 A0A1B0GU33 70 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 COLCA2A8K830 154 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 TP53I11O14683 189 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 OVOL1O14753 267 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 CREBL2O60519 120 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-204ENST00000412061 UBBP0CG47 229 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 GZMBP10144 247 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 AZU1P20160 251 aa2.68□□□□□ -1.98
BRCA1-204ENST00000412061 EVX1P49640 407 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 460.9 ms