RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 HES5Q5TA89 166 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 HACD4Q5VWC8 232 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZFP1Q6P2D0 407 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SSX7Q7RTT5 188 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 C10orf67Q8IYJ2 551 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TSPAN14Q8NG11 270 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR4B1Q8NGF8 309 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR13F1Q8NGS4 319 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SECTM1Q8WVN6 248 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 FCAMRQ8WWV6 532 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 BORCS5Q969J3 196 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM203Q969S6 136 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM230Q96A57 120 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 CLUHP3Q96NS8 147 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 GPHA2Q96T91 129 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 GFI1Q99684 422 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 UPK3BQ9BT76 320 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM208Q9BTX3 173 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 MND1Q9BWT6 205 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SLC5A7Q9GZV3 580 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 MAGT1Q9H0U3 335 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZFAND3Q9H8U3 227 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 NRN1Q9NPD7 142 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZNF586Q9NXT0 402 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 COMMD9Q9P000 198 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 PSORS1C1Q9UIG5 152 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 DAPK2Q9UIK4 370 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ANXA10Q9UJ72 324 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 PLA2G2DQ9UNK4 145 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 NSG2Q9Y328 171 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TRAV30A0A087WSZ9 112 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 CBY3A6NI87 242 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 IFITM5A6NNB3 132 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 FAM90A26D6RGX4 464 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PDCD5O14737 125 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 CASQ2O14958 399 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 GSTZ1O43708 216 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PGLYRP1O75594 196 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATP5HO75947 161 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SCGNO76038 276 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PLA2G1BP04054 148 aaKnown RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 HNRNPCP07910 306 aaKnown RBP eCLIP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 GCSHP23434 173 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 CALRP27797 417 aaKnown RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 TSPOP30536 169 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 G6PCP35575 357 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 FUSP35637 526 aaKnown RBP eCLIP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 ID1P41134 155 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 LPAR6P43657 344 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PPP5CP53041 499 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SUB1P53999 127 aaKnown RBP eCLIP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 LINC00315P59091 139 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 FXYD4P59646 89 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 GNG2P59768 71 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 KRTAP10-1P60331 282 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 HSPE1P61604 102 aaKnown RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 B2MP61769 119 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 RPS25P62851 125 aaKnown RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PSG9Q00887 426 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 PRCDQ00LT1 54 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 TRAM1Q15629 374 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SPATA31B1PQ5VZV4 182 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 EBLN2Q6P2I7 272 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 C16orf54Q6UWD8 224 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SIGLEC15Q6ZMC9 328 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM91Q6ZNR0 172 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 FOXI2Q6ZQN5 318 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZNF818PQ6ZRF7 136 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 Q6ZRN7 208 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 AHSA2Q719I0 299 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 CMTM1Q8IZ96 169 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 C1orf158Q8N1D5 194 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZNF114Q8NC26 417 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 BPIFB6Q8NFQ5 453 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 BEST4Q8NFU0 473 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR4C16Q8NGL9 310 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR6F1Q8NGZ6 308 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR4X1Q8NH49 305 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR4A16Q8NH70 328 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 LGALS14Q8TCE9 139 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 RXFP4Q8TDU9 374 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 DEFB104AQ8WTQ1 72 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 Q8WTZ3 238 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 RNF141Q8WVD5 230 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 NUDCD2Q8WVJ2 157 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 GLMPQ8WWB7 406 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 CYGBQ8WWM9 190 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 UFD1Q92890 307 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 GNPNAT1Q96EK6 184 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 LINC00052Q96N35 136 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 UHRF2Q96PU4 802 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 ABHD1Q96SE0 405 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM70Q9BUB7 260 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 KRTAP1-5Q9BYS1 174 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SLC35B3Q9H1N7 401 aa1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SAV1Q9H4B6 383 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 FNDC4Q9H6D8 234 aaPredicted RBP1.64□□□□□ -2.15
RNU4-53P-201ENST00000410828 SCPEP1Q9HB40 452 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms