RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 FAM168AQ92567 244 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
PRAME-205ENST00000405655 A0A1W2PN81 502 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 MPDU1O75352 247 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 SAA4P35542 130 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 CHRNA7P36544 502 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 PDLIM4P50479 330 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 MEF2BQ02080 365 aaPredicted RBP11.18□□□□□ -0.62
PRAME-205ENST00000405655 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
PRAME-205ENST00000405655 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 LY86O95711 162 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 OR10J4P0C629 311 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 SSX3Q99909 188 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 NAV2Q8IVL1 2488 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 COLCA2A8K830 154 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 NBR2O15453 112 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
PRAME-205ENST00000405655 ZFP82Q8N141 532 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
PRAME-205ENST00000405655 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
PRAME-205ENST00000405655 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
PRAME-205ENST00000405655 FXYD3Q14802 87 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 LINC00518Q8N0U6 118 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 SLC35E1Q96K37 410 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 HELZ2Q9BYK8 2649 aaKnown RBP11.16□□□□□ -0.62
PRAME-205ENST00000405655 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 MT-CO2P00403 227 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 PSMB3P49720 205 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
PRAME-205ENST00000405655 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 IGHV3-23P01764 117 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 HNF1AP20823 631 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 CEACAM3P40198 252 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 HABP2Q14520 560 aaPredicted RBP11.15□□□□□ -0.62
PRAME-205ENST00000405655 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.62
PRAME-205ENST00000405655 IGHV4-38-2P0DP08 117 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 GCHFRP30047 84 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 RAB31Q13636 194 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 RBMS3Q6XE24 437 aaKnown RBP11.14□□□□□ -0.63
PRAME-205ENST00000405655 C1orf122Q6ZSJ8 110 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 PARLQ9H300 379 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 CRYBA1P05813 215 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 PYYP10082 97 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 CX3CL1P78423 397 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 ZNF114Q8NC26 417 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 TVP23CQ96ET8 276 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 NIPSNAP3BQ9BS92 247 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
PRAME-205ENST00000405655 UNKLQ9H9P5 680 aaKnown RBP11.14□□□□□ -0.63
PRAME-205ENST00000405655 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
PRAME-205ENST00000405655 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 NDUFB4O95168 129 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 IFNA1P01562 189 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 TMEM11P17152 192 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
PRAME-205ENST00000405655 RHOBP62745 196 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 C2CD4CQ8TF44 421 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 SPOCK3Q9BQ16 436 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 VWC2LB2RUY7 222 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 H3BTX0 84 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 AVPP01185 164 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 ORM2P19652 201 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 UBE2E1P51965 193 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.632e-36■■□□□ 13
PRAME-205ENST00000405655 ADIRFQ15847 76 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 BCL6BQ8N143 479 aaPredicted RBP11.13□□□□□ -0.63
PRAME-205ENST00000405655 NPBQ8NG41 125 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 RNASEH2CQ8TDP1 164 aaKnown RBP11.13□□□□□ -0.63
PRAME-205ENST00000405655 SDF2L1Q9HCN8 221 aa11.13□□□□□ -0.63
PRAME-205ENST00000405655 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms