RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SULT1A2P50226 295 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 RAB31Q13636 194 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 VWC2Q2TAL6 325 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 TMEM95Q3KNT9 176 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 CLLU1Q5K131 121 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 FFAR4Q5NUL3 377 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 MIC13Q5XKP0 118 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 ACSM6Q6P461 480 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 Q6ZRG5 221 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 TEX29Q8N6K0 151 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 CITED4Q96RK1 184 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 MGST2Q99735 147 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 SRSF8Q9BRL6 282 aaKnown RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 MRPL36Q9P0J6 103 aaKnown RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 VPREB3Q9UKI3 123 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 WDR83OSQ9Y284 106 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 IGKV1OR2-108A0A075B7D4 117 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 AGPAT2O15120 278 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 LY6G6DO95868 133 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 GPX4P36969 197 aaPredicted RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 GCSAMLQ5JQS6 135 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 PXDC1Q5TGL8 231 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 ETFRF1Q6IPR1 90 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 TTC9CQ8N5M4 171 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 ZNF114Q8NC26 417 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 CACNG8Q8WXS5 425 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 GSX1Q9H4S2 264 aaPredicted RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 TRAV41A0A0B4J266 112 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 NPIPB5A8MRT5 1133 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 CORTO00230 105 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 HMGB3O15347 200 aaKnown RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 CRYGCP07315 174 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 OR10J1P30954 320 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 RAB2AP61019 212 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 B2MP61769 119 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 ZNF90Q03938 601 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 TMEM144Q7Z5S9 345 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SFT2D1Q8WV19 159 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 RPRMQ9NS64 109 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 LSM4Q9Y4Z0 139 aaKnown RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 PXMP4Q9Y6I8 212 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 TRIM77I1YAP6 450 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 CYB5BO43169 146 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 ATP6V1G1O75348 118 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 MPDU1O75352 247 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 TSPAN15O95858 294 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 CD99P14209 185 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SRD5A1P18405 259 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 RAB5CP51148 216 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 RHOGP84095 191 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SERF2P84101 59 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 AKIRIN2Q53H80 203 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 LCN15Q6UWW0 184 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 C16orf82Q7Z2V1 217 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 ZNF329Q86UD4 541 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 STPG3Q8N7X2 389 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 BPIFCQ8NFQ6 507 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 OR10G4Q8NGN3 311 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 OR10G9Q8NGN4 311 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 OR10G7Q8NGN6 311 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 OR1L6Q8NGR2 347 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FANCD2OSQ96PS1 177 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 PSMG3Q9BT73 122 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 PARD6GQ9BYG4 376 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 THYN1Q9P016 225 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FBXL7Q9UJT9 491 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 C2CD3Q4AC94 2353 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 IGLV11-55A0A075B6I3 123 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 MFSD2BA6NFX1 497 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 I3L2K1 104 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 K7EIM0 57 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 AP4M1O00189 453 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SOX15O60248 233 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 NDUFB8O95169 186 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 IGHG2P01859 326 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 H2AFB1P0C5Y9 115 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 MDKP21741 143 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 BLOC1S1P78537 153 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 NDUFA5Q16718 116 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 C15orf32Q32M92 178 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 Q56UQ5 140 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FAM122CQ6P4D5 195 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 LCNL1Q6ZST4 164 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 COMMD7Q86VX2 200 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FAM110DQ8TAY7 271 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 LRRC20Q8TCA0 184 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SLC25A22Q9H936 323 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 DOK5Q9P104 306 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 PFDN2Q9UHV9 154 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 TIMM9Q9Y5J7 89 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 WNK1Q9H4A3 2382 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FNDC10F2Z333 226 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 FGF8P55075 233 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 TMEM41BQ5BJD5 291 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 RPP25LQ8N5L8 163 aaKnown RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 TMEM116Q8NCL8 245 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 SAT2Q96F10 170 aaPredicted RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 TMEM68Q96MH6 324 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms