RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MGST2Q99735 147 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 FAM103A1Q9BTL3 118 aaKnown RBP16.59■□□□□ 0.25
TPM1-208ENST00000404484 GGTLC1Q9BX51 225 aa16.59■□□□□ 0.25
TPM1-208ENST00000404484 SOX21Q9Y651 276 aaPredicted RBP16.59■□□□□ 0.25
TPM1-208ENST00000404484 TEX46H3BTG2 121 aa16.58■□□□□ 0.24
TPM1-208ENST00000404484 S100A1P23297 94 aa16.58■□□□□ 0.24
TPM1-208ENST00000404484 ELLP55199 621 aaPredicted RBP16.58■□□□□ 0.24
TPM1-208ENST00000404484 TTC9CQ8N5M4 171 aa16.58■□□□□ 0.24
TPM1-208ENST00000404484 LYPD6BQ8NI32 183 aa16.58■□□□□ 0.24
TPM1-208ENST00000404484 HRH4Q9H3N8 390 aa16.58■□□□□ 0.24
TPM1-208ENST00000404484 BTBD17A6NE02 478 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 AGPAT2O15120 278 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 TSPAN15O95858 294 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 MFAP2P55001 183 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 RAB2AP61019 212 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 ACOT6Q3I5F7 207 aaPredicted RBP16.57■□□□□ 0.24
TPM1-208ENST00000404484 COMMD1Q8N668 190 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 MARC2Q969Z3 335 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 CITED4Q96RK1 184 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 FNDC4Q9H6D8 234 aaPredicted RBP16.57■□□□□ 0.24
TPM1-208ENST00000404484 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
TPM1-208ENST00000404484 RAB19A4D1S5 217 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 HBE1P02100 147 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 FHITP49789 147 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 LY6EQ16553 131 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 EIF4E3Q8N5X7 224 aaKnown RBP16.56■□□□□ 0.24
TPM1-208ENST00000404484 LFNGQ8NES3 379 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 ACY3Q96HD9 319 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 HSPB9Q9BQS6 159 aa16.56■□□□□ 0.24
TPM1-208ENST00000404484 MFSD2BA6NFX1 497 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 H2AFB1P0C5Y9 115 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 M6PRP20645 277 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 RPL29P47914 159 aaKnown RBP16.55■□□□□ 0.24
TPM1-208ENST00000404484 ACSM6Q6P461 480 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 BCL6BQ8N143 479 aaPredicted RBP16.55■□□□□ 0.24
TPM1-208ENST00000404484 PXMP4Q9Y6I8 212 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 ASPHD1Q5U4P2 390 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 OR2T6Q8NHC8 308 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 MDFIQ99750 246 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 THYN1Q9P016 225 aa16.55■□□□□ 0.24
TPM1-208ENST00000404484 MDFIC2A0A1B0GVS7 189 aa16.54■□□□□ 0.24
TPM1-208ENST00000404484 ATP6V0E1O15342 81 aa16.54■□□□□ 0.24
TPM1-208ENST00000404484 MT-CO2P00403 227 aa16.54■□□□□ 0.24
TPM1-208ENST00000404484 EGR2P11161 476 aaPredicted RBP16.54■□□□□ 0.24
TPM1-208ENST00000404484 SRSF2Q01130 221 aaKnown RBP16.54■□□□□ 0.24
TPM1-208ENST00000404484 MLANAQ16655 118 aa16.54■□□□□ 0.24
TPM1-208ENST00000404484 THAP8Q8NA92 274 aa16.54■□□□□ 0.24
TPM1-208ENST00000404484 FAM110DQ8TAY7 271 aaPredicted RBP16.54■□□□□ 0.24
TPM1-208ENST00000404484 AMY1AP04745 511 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 HIST1H1BP16401 226 aaKnown RBP16.53■□□□□ 0.24
TPM1-208ENST00000404484 IER3P46695 156 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 RND2P52198 227 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 B2MP61769 119 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 AKIRIN2Q53H80 203 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 UQCC3Q6UW78 93 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 UNQ5815/PRO19632Q6UWF5 114 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 C19orf35Q6ZS72 473 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 TMEM116Q8NCL8 245 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 OR10G4Q8NGN3 311 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 OR10G9Q8NGN4 311 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 OR10G7Q8NGN6 311 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 NPIPB3Q92617 1050 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 RCC1LQ96I51 464 aaKnown RBP16.53■□□□□ 0.24
TPM1-208ENST00000404484 ACTR3CQ9C0K3 210 aaPredicted RBP16.53■□□□□ 0.24
TPM1-208ENST00000404484 VSIRQ9H7M9 311 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 SLC45A2Q9UMX9 530 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 DMRT1Q9Y5R6 373 aa16.53■□□□□ 0.24
TPM1-208ENST00000404484 IGLV11-55A0A075B6I3 123 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 TRAV1-1A0A0B4J248 108 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 I3L2K1 104 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 OR10J1P30954 320 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 CRIP2P52943 208 aaPredicted RBP16.52■□□□□ 0.24
TPM1-208ENST00000404484 SELENOTP62341 195 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 MIC13Q5XKP0 118 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 STPG3Q8N7X2 389 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 MBD3L1Q8WWY6 194 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 PRDM13Q9H4Q3 707 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
TPM1-208ENST00000404484 CTXND1A0A1B0GTU2 59 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 IGHV4-59P01825 116 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 PRR20EP86478 221 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 PRR20CP86479 221 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 PRR20DP86480 221 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 PRR20BP86481 221 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 PRR20AP86496 221 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 ECSCRQ19T08 205 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 Q6YL49 198 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 SFT2D1Q8WV19 159 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 IGKV1OR2-108A0A075B7D4 117 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 ZFP92A6NM28 416 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 CYP2G1PQ6ZSU1 146 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 RPP25LQ8N5L8 163 aaKnown RBP16.51■□□□□ 0.23
TPM1-208ENST00000404484 OR4X1Q8NH49 305 aa16.51■□□□□ 0.23
TPM1-208ENST00000404484 TCRBV4S1A1TA0A5B7 111 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 SCGB2A2Q13296 93 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 C9orf152Q5JTZ5 239 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 FANCD2OSQ96PS1 177 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 TRGV9Q99603 122 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 VPREB3Q9UKI3 123 aa16.5■□□□□ 0.23
TPM1-208ENST00000404484 SEC14L6B5MCN3 397 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms