RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 TSPAN9O75954 239 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 MT-CO2P00403 227 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 PEA15Q15121 130 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 CYB5R2Q6BCY4 276 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 TTC9CQ8N5M4 171 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 RAB24Q969Q5 203 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 MAP1LC3BQ9GZQ8 125 aa10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 MRPL36Q9P0J6 103 aaKnown RBP10.51□□□□□ -0.73
CEACAM1-206ENST00000403136 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 C9JQL5 133 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 EIF3GO75821 320 aaKnown RBP eCLIP10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 RND2P52198 227 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 HSPB9Q9BQS6 159 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
CEACAM1-206ENST00000403136 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 A0A1W2PPV4 95 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 I3L2K1 104 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 CDC34P49427 236 aaPredicted RBP10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 CYP2G1PQ6ZSU1 146 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 RARRES2Q99969 163 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 IGKV1D-37A0A075B6S9 117 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 A6NDX4 124 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 H3BUX3 64 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 PMS2P11Q13670 270 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 SGMS2Q8NHU3 365 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 NANPQ8TBE9 248 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 C22orf15Q8WYQ4 148 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 SMDT1Q9H4I9 107 aa10.49□□□□□ -0.73
CEACAM1-206ENST00000403136 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 ZFP92A6NM28 416 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 FSHBP01225 129 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 AMY1AP04745 511 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 LY6EQ16553 131 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 HAGHQ16775 308 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 OR5T1Q8NG75 326 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 FANCD2OSQ96PS1 177 aa10.48□□□□□ -0.73
CEACAM1-206ENST00000403136 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 IGLV11-55A0A075B6I3 123 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SH2D7A6NKC9 451 aaPredicted RBP10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 LINC01548A6NM66 108 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 K7EIM0 57 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SELENOTP62341 195 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 ZNF90Q03938 601 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 CIARTQ8N365 385 aaPredicted RBP10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 FOXC2Q99958 501 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 CR1P17927 2039 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 F8W036 122 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 ATP6V0E1O15342 81 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 APOC3P02656 99 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SFTA3P0C7M3 94 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 RHOBP62745 196 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 ZNF506Q5JVG8 444 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 C10orf91Q5T1B1 145 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SLC35E3Q7Z769 313 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 TRGV9Q99603 122 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 TMUB1Q9BVT8 246 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 C19orf24Q9BVV8 132 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 TMPRSS5Q9H3S3 457 aa10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
CEACAM1-206ENST00000403136 CCDC168Q8NDH2 2452 aa10.46□□□□□ -0.73
CEACAM1-206ENST00000403136 MDFIC2A0A1B0GVS7 189 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 STAG3L2P0CL84 134 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 STAG3L3P0CL85 134 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 ADCYAP1P18509 176 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 PPT1P50897 306 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 ICAM4Q14773 271 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 AKIRIN2Q53H80 203 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 KHDC3LQ587J8 217 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 UNQ5815/PRO19632Q6UWF5 114 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 RBMS3Q6XE24 437 aaKnown RBP10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 SLC35B3Q9H1N7 401 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 THYN1Q9P016 225 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 FASNP49327 2511 aaKnown RBP10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 UNC79Q9P2D8 2635 aa10.46□□□□□ -0.74
CEACAM1-206ENST00000403136 CSMD1Q96PZ7 3565 aa10.45□□□□□ -0.74
CEACAM1-206ENST00000403136 LOC102723971A0A1B0GUV8 181 aa10.45□□□□□ -0.74
CEACAM1-206ENST00000403136 M0QZK8 103 aa10.45□□□□□ -0.74
CEACAM1-206ENST00000403136 IFNA1P01562 189 aa10.45□□□□□ -0.74
CEACAM1-206ENST00000403136 FAM78BQ5VT40 261 aa10.45□□□□□ -0.74
CEACAM1-206ENST00000403136 SPATA31B1PQ5VZV4 182 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms