RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 K7ESF4 209 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 YRDCQ86U90 279 aaKnown RBP8.32□□□□□ -1.08
PTPRM-203ENST00000400060 TMEM178AQ8NBL3 297 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 NUPR1O60356 82 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 LMO1P25800 156 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 GCSAMLQ5JQS6 135 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 CNEP1R1Q8N9A8 125 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 NAA38Q9BRA0 125 aaKnown RBP8.31□□□□□ -1.08
PTPRM-203ENST00000400060 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 CASP8AP2Q9UKL3 1982 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 IGKV1-5P01602 117 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 RBP4P02753 201 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 ATXN8Q156A1 80 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 C6orf15Q6UXA7 325 aaPredicted RBP8.31□□□□□ -1.08
PTPRM-203ENST00000400060 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 MOB3BQ86TA1 216 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 IGKV1D-43A0A0B4J1Z2 117 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 IGKV3-11P04433 115 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 CEND1Q8N111 149 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 KIR3DL3Q8N743 410 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 B5MCH6 92 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 PPP1CAP62136 330 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 ETDBQ3ZM63 59 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 Q6ZVH6 145 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
PTPRM-203ENST00000400060 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
PTPRM-203ENST00000400060 FOXI3A8MTJ6 420 aaPredicted RBP8.3□□□□□ -1.08
PTPRM-203ENST00000400060 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 PPP1R27Q86WC6 154 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 MTCL1Q9Y4B5 1905 aaKnown RBP8.3□□□□□ -1.08
PTPRM-203ENST00000400060 A0A1W2PQF6 199 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 H3BMG7 143 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 LEPP41159 167 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 ABHD12Q8N2K0 398 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV1OR15-9A0A0B4J2B8 117 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 WIPF3A6NGB9 483 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 SMIM20Q8N5G0 67 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 RCHY1Q96PM5 261 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 C1QTNF5Q9BXJ0 243 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 MGST3O14880 152 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 ZIC3O60481 467 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 NXPH1P58417 271 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 VWC2Q2TAL6 325 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 LINC00696Q6ZRV3 163 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 COQ2Q96H96 371 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 IDI2-AS1Q9NZ38 188 aa8.3□□□□□ -1.08
PTPRM-203ENST00000400060 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 S100A4P26447 101 aaKnown RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 RFESDQ8TAC1 157 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 LINC01545Q5VT33 79 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 SH2D7A6NKC9 451 aaPredicted RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 C15orf61A6NNL5 157 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 TMEM42Q69YG0 159 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 UBALD2Q8IYN6 164 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 LRRC29Q8WV35 223 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 SPATA25Q9BR10 227 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 ONECUT1Q9UBC0 465 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 SRSF1Q07955 248 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 IL11RAQ14626 422 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 ZNF497Q6ZNH5 498 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
PTPRM-203ENST00000400060 RNF166Q96A37 237 aaPredicted RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 KLF13Q9Y2Y9 288 aaPredicted RBP8.29□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV3-9P01782 118 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 J3KT08 172 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 LIFP15018 202 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 LYPD6Q86Y78 171 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 DEPPQ9NTK1 212 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 ZNF785A8K8V0 405 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 HAX1O00165 279 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 CCL7P80098 99 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 PPP1R32Q7Z5V6 425 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 SEC16AO15027 2179 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 EBLN2Q6P2I7 272 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
PTPRM-203ENST00000400060 LGALS7P47929 136 aa8.27□□□□□ -1.08
PTPRM-203ENST00000400060 TIMD4Q96H15 378 aa8.27□□□□□ -1.08
PTPRM-203ENST00000400060 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.08
PTPRM-203ENST00000400060 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 C22orf46C9J442 243 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 C2orf83Q53S99 150 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 MEIG1Q5JSS6 88 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 TUSC5Q8IXB3 177 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 INO80CQ6PI98 192 aaPredicted RBP8.27□□□□□ -1.09
PTPRM-203ENST00000400060 OR11H6Q8NGC7 330 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 OR4C13Q8NGP0 309 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 IGLV3-32A0A0A0MS00 114 aa8.27□□□□□ -1.09
PTPRM-203ENST00000400060 ZNF501Q96CX3 271 aaPredicted RBP8.27□□□□□ -1.09
PTPRM-203ENST00000400060 F2Z2F3 143 aa8.26□□□□□ -1.09
PTPRM-203ENST00000400060 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms