RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 TRAV30A0A087WSZ9 112 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 TFF1P04155 84 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 TYMSP04818 313 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 MFAP4P55083 255 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 FAM216BQ8N7L0 139 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 MGST2Q99735 147 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 ACACAQ13085 2346 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 A0A1B0GW15 77 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 IL4P05112 153 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 SAA1P0DJI8 122 aaPredicted RBP9.19□□□□□ -0.94
HPS4-202ENST00000398145 PRCDQ00LT1 54 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 PSMG4Q5JS54 123 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 C1orf185Q5T7R7 199 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 LCN12Q6JVE5 192 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 SPCS1Q9Y6A9 102 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 IGHV2OR16-5A0A0B4J2B6 119 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 FAM90A27PA6NNH2 459 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 C15orf62A8K5M9 175 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 M0QZ24 198 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 ANOS1P23352 680 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 GNG5P63218 68 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 PSG9Q00887 426 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 RELQ04864 619 aaPredicted RBP9.18□□□□□ -0.94
HPS4-202ENST00000398145 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 Q9H3A6 140 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 CADP27708 2225 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 NOTCH4Q99466 2003 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 H3BUT2 72 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 NTF4P34130 210 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 TIMM23BQ5SRD1 257 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 ATP1A1-AS1Q5TC04 95 aa9.18□□□□□ -0.94
HPS4-202ENST00000398145 MRPL20Q9BYC9 149 aaKnown RBP9.18□□□□□ -0.94
HPS4-202ENST00000398145 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
HPS4-202ENST00000398145 DOCK10Q96BY6 2186 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 A0A1B0GUS0 222 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 M0R3E3 92 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 Q6P435 159 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
HPS4-202ENST00000398145 HS3ST6Q96QI5 342 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 PINLYPA6NC86 204 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 HIST1H1AQ02539 215 aaPredicted RBP9.17□□□□□ -0.94
HPS4-202ENST00000398145 UBE2V1Q13404 147 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
HPS4-202ENST00000398145 NUDT10Q8NFP7 164 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 NUDT11Q96G61 164 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 TRAV8-6A0A0B4J262 113 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 SFTPCP11686 197 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 ECSCRQ19T08 205 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 C5orf30Q96GV9 206 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 TANC1Q9C0D5 1861 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 TSPOP30536 169 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 Q0VG73 95 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
HPS4-202ENST00000398145 THSD7BQ9C0I4 1608 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 IGKV3-7A0A075B6H7 116 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 LINC00473A8K010 186 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 OR11H12B2RN74 326 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 GFRA3O60609 400 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 TM4SF20Q53R12 229 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 LILRA1O75019 489 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 GFRA1P56159 465 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 RSPO1Q2MKA7 263 aaPredicted RBP9.16□□□□□ -0.94
HPS4-202ENST00000398145 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
HPS4-202ENST00000398145 ZNF257Q9Y2Q1 563 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 TRBV20OR9-2A0A075B6H5 130 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 LYPD6Q86Y78 171 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 TEX45Q8NA69 505 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 NEUROG1Q92886 237 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 ZNF71Q9NQZ8 489 aaPredicted RBP9.16□□□□□ -0.94
HPS4-202ENST00000398145 TMEM160Q9NX00 188 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 JKAMPQ9P055 326 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
HPS4-202ENST00000398145 F2RL2O00254 374 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 FOXH1O75593 365 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 SEC11AP67812 179 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
HPS4-202ENST00000398145 CLEC7AQ9BXN2 247 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 A0A1B0GV72 72 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 COLCA1Q6ZS62 124 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 OR2K2Q8NGT1 345 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms