RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ERHP84090 104 aaKnown RBP6.36□□□□□ -1.39
CAPN3-208ENST00000397204 IDNKQ5T6J7 187 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 LPCAT3Q6P1A2 487 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 MORN3Q6PF18 240 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-208ENST00000397204 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 IZUMO2Q6UXV1 221 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 STHQ8IWL8 128 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 Q8NAQ8 132 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 ZNF114Q8NC26 417 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 OR6F1Q8NGZ6 308 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 S100A16Q96FQ6 103 aaKnown RBP6.36□□□□□ -1.39
CAPN3-208ENST00000397204 ZNF2Q9BSG1 426 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-208ENST00000397204 YTHDF1Q9BYJ9 559 aaKnown RBP6.36□□□□□ -1.39
CAPN3-208ENST00000397204 IFT46Q9NQC8 304 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 EHFQ9NZC4 300 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 RAB26Q9ULW5 256 aa6.36□□□□□ -1.39
CAPN3-208ENST00000397204 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 A0A1W2PS18 150 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 GPR31O00270 319 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM50AO95807 157 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-208ENST00000397204 CLEC2LP0C7M8 214 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 RBMY1A1P0DJD3 496 aaKnown RBP6.35□□□□□ -1.39
CAPN3-208ENST00000397204 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 TAS2R46P59540 309 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 RBMY1FQ15415 496 aaKnown RBP6.35□□□□□ -1.39
CAPN3-208ENST00000397204 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 H2BFWTQ7Z2G1 175 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 LILRB2Q8N423 598 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 OR4A16Q8NH70 328 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 ST8SIA2Q92186 375 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 GRAMD2BQ96HH9 432 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 SEC22AQ96IW7 307 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 RNF126Q9BV68 326 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 TMEM231Q9H6L2 316 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 ANAPC10Q9UM13 185 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 X6R8D5 127 aa6.35□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV4-28A0A0C4DH34 117 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 MEIS3P1A6NDR6 274 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 ZNF705EA8MWA4 302 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-208ENST00000397204 IGHV3-48P01763 117 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 PMP2P02689 132 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 APOHP02749 345 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-208ENST00000397204 SPP1P10451 314 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 NPPCP23582 126 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 SNCAP37840 140 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 PRCDQ00LT1 54 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 LEMD1Q68G75 181 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 ZNF600Q6ZNG1 722 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 TRPT1Q86TN4 253 aaKnown RBP6.34□□□□□ -1.39
CAPN3-208ENST00000397204 LYSMD2Q8IV50 215 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 CROCCP3Q8IVE0 287 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 OR5H2Q8NGV7 314 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 PINX1Q96BK5 328 aaKnown RBP6.34□□□□□ -1.39
CAPN3-208ENST00000397204 RABAC1Q9UI14 185 aa6.34□□□□□ -1.39
CAPN3-208ENST00000397204 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
CAPN3-208ENST00000397204 PKD1P98161 4303 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 LOC100506127A0A0U1RQW1 187 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 INS-IGF2F8WCM5 200 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 K7EQG2 157 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 PRSS3P35030 304 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
CAPN3-208ENST00000397204 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 Q6ZTC4 211 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 RNF167Q9H6Y7 350 aa6.33□□□□□ -1.4
CAPN3-208ENST00000397204 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 A0A1B0GU03 582 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 IGKV1-39P01597 117 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 IGKV1D-39P04432 117 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 P0DMU3 169 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 FAM231AP0DMU4 169 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 FAM231CP0DMU5 169 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 NPY1RP25929 384 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 CRYBB3P26998 211 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 UCP3P55916 312 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 TSPAN5P62079 268 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 PHLDA2Q53GA4 152 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 TMEM69Q5SWH9 247 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 FAM24BQ8N5W8 94 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 CSNK1G2-AS1Q8NCQ2 148 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 NARS2Q96I59 477 aaKnown RBP6.32□□□□□ -1.4
CAPN3-208ENST00000397204 METTL26Q96S19 204 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 FXYD6Q9H0Q3 95 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 TBC1D24Q9ULP9 559 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 MUC4Q99102 2169 aa6.32□□□□□ -1.4
CAPN3-208ENST00000397204 DEFB131BA0A096LNP1 70 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 CORTO00230 105 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 BTF3P20290 206 aaKnown RBP6.31□□□□□ -1.4
CAPN3-208ENST00000397204 HLA-DMAP28067 261 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 HRH1P35367 487 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 RPL5P46777 297 aaKnown RBP6.31□□□□□ -1.4
CAPN3-208ENST00000397204 EIF2B2P49770 351 aaKnown RBP6.31□□□□□ -1.4
CAPN3-208ENST00000397204 AP2S1P53680 142 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms