RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 Q6AWC8 147 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 SLC25A47Q6Q0C1 308 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 LOC101059948A0A1B0GTJ6 334 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 SLC25A39Q9BZJ4 359 aaPredicted RBP10.32□□□□□ -0.76
SMU1-201ENST00000397149 ABCA1O95477 2261 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 DDX60Q8IY21 1712 aaKnown RBP10.32□□□□□ -0.76
SMU1-201ENST00000397149 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
SMU1-201ENST00000397149 Q71RC1 249 aaPredicted RBP10.31□□□□□ -0.76
SMU1-201ENST00000397149 A0A087WWL8 130 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 C1QTNF9P0C862 333 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 SPRED2Q7Z698 418 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 DEPPQ9NTK1 212 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 PIKFYVEQ9Y2I7 2098 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 BCL6BQ8N143 479 aaPredicted RBP10.31□□□□□ -0.76
SMU1-201ENST00000397149 OR10W1Q8NGF6 305 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 OSR1Q8TAX0 266 aaPredicted RBP10.31□□□□□ -0.76
SMU1-201ENST00000397149 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 C1QL4Q86Z23 238 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 CACNG8Q8WXS5 425 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 CADP27708 2225 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 SRRM4A7MD48 611 aaKnown RBP10.31□□□□□ -0.76
SMU1-201ENST00000397149 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 AQP3Q92482 292 aa10.31□□□□□ -0.76
SMU1-201ENST00000397149 RGPD1P0DJD0 1748 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 A0A096LPF7 62 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 A0A1W2PRS3 328 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 TBX6O95947 436 aaPredicted RBP10.3□□□□□ -0.76
SMU1-201ENST00000397149 PPP1R32Q7Z5V6 425 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 SPTBN1Q01082 2364 aaKnown RBP10.3□□□□□ -0.76
SMU1-201ENST00000397149 A0A1B0GW15 77 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 RALGAPA1Q6GYQ0 2036 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 CECR9P0C854 216 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 PMVKQ15126 192 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 ASPHD2Q6ICH7 369 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 A0A1W2PPI3 338 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 CELA3AP09093 270 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
SMU1-201ENST00000397149 CDK5RAP2Q96SN8 1893 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 CD55P08174 381 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 PLAC1Q9HBJ0 212 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 PI4KAP42356 2102 aa10.3□□□□□ -0.76
SMU1-201ENST00000397149 UBE2BP63146 152 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
SMU1-201ENST00000397149 SOCS3O14543 225 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 RAMP1O60894 148 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 WNT2P09544 360 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 H2BFSP57053 126 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 Q96M66 194 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 KIF13AQ9H1H9 1805 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 RBM3P98179 157 aaKnown RBP10.29□□□□□ -0.76
SMU1-201ENST00000397149 N4BP2Q86UW6 1770 aaPredicted RBP10.29□□□□□ -0.76
SMU1-201ENST00000397149 CRYBG1Q9Y4K1 1723 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 A0A087X0K7 114 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 DUTP33316 252 aaKnown RBP10.29□□□□□ -0.76
SMU1-201ENST00000397149 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 ZNF329Q86UD4 541 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 MCRIP2Q9BUT9 160 aaKnown RBP10.29□□□□□ -0.76
SMU1-201ENST00000397149 CSTL1Q9H114 145 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 TAF1P21675 1872 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 A0A1W2PPV9 198 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 PHIPQ8WWQ0 1821 aa10.29□□□□□ -0.76
SMU1-201ENST00000397149 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 PEX11BO96011 259 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 C1QCP02747 245 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
SMU1-201ENST00000397149 Q5BKY6 102 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FANCMQ8IYD8 2048 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 hDV102S1A0JD36 115 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 LIMS2Q7Z4I7 341 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 LAMA4Q16363 1823 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A18PA6NE21 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A16PA6NEW6 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A5PA8MXJ8 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 D6R8Y8 96 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A15PP0C7V4 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 FAM90A14PP0C7W9 464 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 TMEM258P61165 79 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 CELA3BP08861 270 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 BHLHA9Q7RTU4 235 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 SCRT2Q9NQ03 307 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 IGHV4-4A0A075B6R2 117 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 BRD3OSQ6XYD6 125 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
SMU1-201ENST00000397149 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.76
SMU1-201ENST00000397149 HSD52Q0P140 79 aa10.27□□□□□ -0.76
SMU1-201ENST00000397149 RASL11AQ6T310 242 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms