RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CAMLGP49069 296 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 ABHD5Q8WTS1 349 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 MISP3Q96FF7 219 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 MT-CO2P00403 227 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 RAB2AP61019 212 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 ETFRF1Q6IPR1 90 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 Q6ZS46 218 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 TRAV1-1A0A0B4J248 108 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 SOX15O60248 233 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 PRH1P02810 166 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 AKR1C1Q04828 323 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 OR5R1Q8NH85 324 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 FAM213BQ8TBF2 198 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 CREBBPQ92793 2442 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 IGHV3-48P01763 117 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 ZNF580Q9UK33 172 aa9.97□□□□□ -0.81
TRIM39-204ENST00000396548 PSMB11A5LHX3 300 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 SEC14L6B5MCN3 397 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 F8W735 103 aaPredicted RBP9.96□□□□□ -0.81
TRIM39-204ENST00000396548 BLCAPP62952 87 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 MIC13Q5XKP0 118 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 RCC1LQ96I51 464 aaKnown RBP9.96□□□□□ -0.81
TRIM39-204ENST00000396548 SLC35E1Q96K37 410 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 PXMP4Q9Y6I8 212 aa9.96□□□□□ -0.81
TRIM39-204ENST00000396548 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.82
TRIM39-204ENST00000396548 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 TEX29Q8N6K0 151 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 STPG3Q8N7X2 389 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 OR4X1Q8NH49 305 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 HRH4Q9H3N8 390 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 TMEM160Q9NX00 188 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 VPREB3Q9UKI3 123 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 NUDT19A8MXV4 375 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 G3V318 75 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 BRI3O95415 125 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 MBP02144 154 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 IL34Q6ZMJ4 242 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 PFDN2Q9UHV9 154 aa9.96□□□□□ -0.82
TRIM39-204ENST00000396548 RAB19A4D1S5 217 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 M6PRP20645 277 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 RND2P52198 227 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 CCL20P78556 96 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 CFHR3Q02985 330 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 OR5T1Q8NG75 326 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 MARC2Q969Z3 335 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 ACY3Q96HD9 319 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 SLC39A9Q9NUM3 307 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 TCRBV4S1A1TA0A5B7 111 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 TSPAN9O75954 239 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 DEFA4P12838 97 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
TRIM39-204ENST00000396548 OR10J1P30954 320 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 CYP2G1PQ6ZSU1 146 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF414Q96IQ9 312 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 TRGV9Q99603 122 aa9.95□□□□□ -0.82
TRIM39-204ENST00000396548 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-204ENST00000396548 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF90Q03938 601 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 UNQ5815/PRO19632Q6UWF5 114 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 CITED4Q96RK1 184 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 CCDC168Q8NDH2 2452 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 IGHV3-21A0A0B4J1V1 117 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 NDUFB8O95169 186 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 TSPAN15O95858 294 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 IGLC1P0CG04 106 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 B2MP61769 119 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 ZNF616Q08AN1 781 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 BPIFCQ8NFQ6 507 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 KCNIP2Q9NS61 270 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 CSPG4Q6UVK1 2322 aa9.94□□□□□ -0.82
TRIM39-204ENST00000396548 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 LOC105371267A0A1B0GV96 52 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-204ENST00000396548 RAB31Q13636 194 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 ACOT6Q3I5F7 207 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-204ENST00000396548 SIGLECL1Q8N7X8 197 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 GATA2P23769 480 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-204ENST00000396548 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-204ENST00000396548 HIST1H1BP16401 226 aaKnown RBP9.93□□□□□ -0.82
TRIM39-204ENST00000396548 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 SPNS3Q6ZMD2 512 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 COMMD1Q8N668 190 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 TMUB1Q9BVT8 246 aa9.93□□□□□ -0.82
TRIM39-204ENST00000396548 CLN5O75503 358 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 CD5P06127 495 aa9.92□□□□□ -0.82
TRIM39-204ENST00000396548 SLC35E3Q7Z769 313 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms