RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 ZNF114Q8NC26 417 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM218A2RU14 115 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 GPR137BO60478 399 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 RPL8P62917 257 aaKnown RBP8.52□□□□□ -1.05
PDGFD-202ENST00000393158 SSX7Q7RTT5 188 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
PDGFD-202ENST00000393158 FN1P02751 2386 aaKnown RBP8.51□□□□□ -1.05
PDGFD-202ENST00000393158 NBR2O15453 112 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 APOA2P02652 100 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 IL3RAP26951 378 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 C5orf64Q2M2E5 130 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 GPR157Q5UAW9 335 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
PDGFD-202ENST00000393158 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
PDGFD-202ENST00000393158 CST7O76096 145 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 HSD17B13Q7Z5P4 300 aaPredicted RBP8.51□□□□□ -1.05
PDGFD-202ENST00000393158 OR5B3Q8NH48 314 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 A0A0D9SG52 128 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 CA2P00918 260 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 IER3P46695 156 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 PKIAP61925 76 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 MLANAQ16655 118 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 OR1L6Q8NGR2 347 aa8.51□□□□□ -1.05
PDGFD-202ENST00000393158 LSM4Q9Y4Z0 139 aaKnown RBP8.51□□□□□ -1.05
PDGFD-202ENST00000393158 METTL15P1P0C7V9 234 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 RPS16P62249 146 aaKnown RBP8.5□□□□□ -1.05
PDGFD-202ENST00000393158 DNAJC4Q9NNZ3 241 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 METTL1Q9UBP6 276 aaKnown RBP8.5□□□□□ -1.05
PDGFD-202ENST00000393158 SH2D7A6NKC9 451 aaPredicted RBP8.5□□□□□ -1.05
PDGFD-202ENST00000393158 M0QZ24 198 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 CEACAM3P40198 252 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 SULT1A1P50225 295 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 NOTCH2Q04721 2471 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 GINS3Q9BRX5 216 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 UBE2CO00762 179 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM182Q6ZP80 229 aaPredicted RBP8.5□□□□□ -1.05
PDGFD-202ENST00000393158 IL17RELQ6ZVW7 336 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 P2RX4Q99571 388 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 PRNDQ9UKY0 176 aa8.5□□□□□ -1.05
PDGFD-202ENST00000393158 CD5LO43866 347 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 PET100P0DJ07 73 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 CRIP2P52943 208 aaPredicted RBP8.49□□□□□ -1.05
PDGFD-202ENST00000393158 HNF4GQ14541 408 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 Q6YL49 198 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 OR5C1Q8NGR4 320 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 NUDT11Q96G61 164 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 CRYGCP07315 174 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 CFHR3Q02985 330 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 ZNF616Q08AN1 781 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 CENPVQ7Z7K6 275 aaPredicted RBP8.49□□□□□ -1.05
PDGFD-202ENST00000393158 OR2T10Q8NGZ9 312 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 ESM1Q9NQ30 184 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 SMCO3A2RU48 225 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 HLA-DRB1P01911 266 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 OR4A16Q8NH70 328 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 FANCD2OSQ96PS1 177 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
PDGFD-202ENST00000393158 PIGBOS1A0A0B4J2F0 54 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 IGHV4-59P01825 116 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 BAXQ07812 192 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 CCDC144NLQ6NUI1 221 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 C2orf88Q9BSF0 95 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 TMUB1Q9BVT8 246 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 KANTRA0A1W2PQU2 76 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 ADCYAP1P18509 176 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 CX3CL1P78423 397 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
PDGFD-202ENST00000393158 HIST1H2BAQ96A08 127 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 FAM103A1Q9BTL3 118 aaKnown RBP8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SNHG12Q9BXW3 62 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SMIM3Q9BZL3 60 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 FGF16O43320 207 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 REG1AP05451 166 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 HIST1H1BP16401 226 aaKnown RBP8.48□□□□□ -1.05
PDGFD-202ENST00000393158 MMDQ15546 238 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 SPANXN5Q5MJ07 72 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 Q6ZVH6 145 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 OR1L8Q8NGR8 309 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
PDGFD-202ENST00000393158 M0R143 59 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 MAS1LP35410 378 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 UBE2G2P60604 165 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 ERVK-16P61578 105 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 PSMB11A5LHX3 300 aa8.47□□□□□ -1.05
PDGFD-202ENST00000393158 TMEM238C9JI98 176 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms