RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 GNG13Q9P2W3 67 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 LINC00869P0C866 280 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 BCL2P10415 239 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 FXYD3Q14802 87 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 TMEM95Q3KNT9 176 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 ZNF562Q6V9R5 426 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 LRRC75A-AS1Q8N1F1 130 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 C1RLQ9NZP8 487 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 NCBP2LA6PVI3 153 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 IFNA1P01562 189 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 FABP1P07148 127 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 APELAP0DMC3 54 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 GATA3P23771 443 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 OR10J1P30954 320 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 ATRAIDQ6UW56 229 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 THAP8Q8NA92 274 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 ACY3Q96HD9 319 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 CHD6Q8TD26 2715 aa9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 ANKRD17O75179 2603 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-203ENST00000392128 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 ZFP92A6NM28 416 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 HMGB3O15347 200 aaKnown RBP9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 EIF3GO75821 320 aaKnown RBP eCLIP9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 DEFA4P12838 97 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 ABHD5Q8WTS1 349 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 MISP3Q96FF7 219 aa9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 NKX6-2Q9C056 277 aaPredicted RBP9.09□□□□□ -0.96
SMARCAL1-203ENST00000392128 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 RUSC1-AS1Q66K80 236 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 Q8N9W7 124 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 OR1L6Q8NGR2 347 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 RXFP4Q8TDU9 374 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 ARPC1AQ92747 370 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
SMARCAL1-203ENST00000392128 RHOBP62745 196 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 CX3CL1P78423 397 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 COTL1Q14019 142 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 C19orf35Q6ZS72 473 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 CYP2G1PQ6ZSU1 146 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 TMEM116Q8NCL8 245 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 NPIPB3Q92617 1050 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 C19orf24Q9BVV8 132 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 MRPL36Q9P0J6 103 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 CENPEQ02224 2701 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 TCRBV4S1A1TA0A5B7 111 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 PSMB3P49720 205 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 RND2P52198 227 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 SLC35E3Q7Z769 313 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 C22orf15Q8WYQ4 148 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 SLC25A33Q9BSK2 321 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 WNT10AQ9GZT5 417 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 MEGF9Q9H1U4 602 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
SMARCAL1-203ENST00000392128 NPIPB5A8MRT5 1133 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 MT-CO2P00403 227 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 SOHLH1Q5JUK2 328 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 FAM103A1Q9BTL3 118 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.962e-8■■■■■ 31.6
SMARCAL1-203ENST00000392128 IGHV3OR16-10A0A075B7F0 116 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 I3L2K1 104 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 SELENOTP62341 195 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 NDPQ00604 133 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 BRD3OSQ6XYD6 125 aa9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 SAV1Q9H4B6 383 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 SEPSECSQ9HD40 501 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-203ENST00000392128 CXorf1O96002 111 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGHV3-48P01763 117 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 GATA2P23769 480 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 BTN1A1Q13410 526 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 ASPHD1Q5U4P2 390 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 TTC9CQ8N5M4 171 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 CYB561D1Q8N8Q1 229 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 MBD6Q96DN6 1003 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 PSMG3-AS1Q96PY0 264 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 TRGV9Q99603 122 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 A0A0U1RQK1 487 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 PSMB11A5LHX3 300 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms