RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 GGTLC1Q9BX51 225 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 VSIRQ9H7M9 311 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 IGLV11-55A0A075B6I3 123 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 UMAD1C9J7I0 102 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 SERF2P84101 59 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 RAB31Q13636 194 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 RBMS3Q6XE24 437 aaKnown RBP21.06■□□□□ 0.96
MSX1-201ENST00000382723 TMEM68Q96MH6 324 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 ZNF355PQ9NSJ1 428 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 SONP18583 2426 aaKnown RBP21.05■□□□□ 0.96
MSX1-201ENST00000382723 TEX46H3BTG2 121 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 CYB5BO43169 146 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 RAB5CP51148 216 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 DEFA5Q01523 94 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 FFAR4Q5NUL3 377 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 ACSM6Q6P461 480 aa21.05■□□□□ 0.96
MSX1-201ENST00000382723 NOL4LQ96MY1 436 aaPredicted RBP21.05■□□□□ 0.96
MSX1-201ENST00000382723 K7EIM0 57 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 MIC13Q5XKP0 118 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 Q6ZRG5 221 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 OR2J3O76001 311 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 CD99P14209 185 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 OR10J1P30954 320 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 TMEM160Q9NX00 188 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 S4R3C0 116 aa21.04■□□□□ 0.96
MSX1-201ENST00000382723 TRIM77I1YAP6 450 aa21.03■□□□□ 0.96
MSX1-201ENST00000382723 IGF1P05019 195 aa21.03■□□□□ 0.96
MSX1-201ENST00000382723 ZNF616Q08AN1 781 aa21.03■□□□□ 0.96
MSX1-201ENST00000382723 SAT2Q96F10 170 aaPredicted RBP21.03■□□□□ 0.96
MSX1-201ENST00000382723 PXMP4Q9Y6I8 212 aa21.03■□□□□ 0.96
MSX1-201ENST00000382723 ANKRD34BA5PLL1 514 aa21.02■□□□□ 0.96
MSX1-201ENST00000382723 PXDC1Q5TGL8 231 aa21.02■□□□□ 0.96
MSX1-201ENST00000382723 Q71RC1 249 aaPredicted RBP21.02■□□□□ 0.96
MSX1-201ENST00000382723 RPRMQ9NS64 109 aa21.02■□□□□ 0.96
MSX1-201ENST00000382723 ZFP92A6NM28 416 aa21.02■□□□□ 0.95
MSX1-201ENST00000382723 SOX15O60248 233 aa21.02■□□□□ 0.95
MSX1-201ENST00000382723 NDUFB8O95169 186 aa21.02■□□□□ 0.95
MSX1-201ENST00000382723 CRIP2P52943 208 aaPredicted RBP21.02■□□□□ 0.95
MSX1-201ENST00000382723 RAB2AP61019 212 aa21.02■□□□□ 0.95
MSX1-201ENST00000382723 THYN1Q9P016 225 aa21.02■□□□□ 0.95
MSX1-201ENST00000382723 BLOC1S1P78537 153 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 TMEM41BQ5BJD5 291 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 C19orf54Q5BKX5 351 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 TMEM116Q8NCL8 245 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 MS4A10Q96PG2 267 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 GSX1Q9H4S2 264 aaPredicted RBP21.01■□□□□ 0.95
MSX1-201ENST00000382723 FBXL7Q9UJT9 491 aa21.01■□□□□ 0.95
MSX1-201ENST00000382723 AP4M1O00189 453 aa21■□□□□ 0.95
MSX1-201ENST00000382723 GATA2P23769 480 aaPredicted RBP21■□□□□ 0.95
MSX1-201ENST00000382723 TMEM95Q3KNT9 176 aa21■□□□□ 0.95
MSX1-201ENST00000382723 STPG3Q8N7X2 389 aa21■□□□□ 0.95
MSX1-201ENST00000382723 BPIFCQ8NFQ6 507 aa21■□□□□ 0.95
MSX1-201ENST00000382723 HRH4Q9H3N8 390 aa21■□□□□ 0.95
MSX1-201ENST00000382723 SLC45A2Q9UMX9 530 aa21■□□□□ 0.95
MSX1-201ENST00000382723 LINC00862A6NCI5 91 aa21■□□□□ 0.95
MSX1-201ENST00000382723 TSPAN9O75954 239 aa21■□□□□ 0.95
MSX1-201ENST00000382723 THAP8Q8NA92 274 aa21■□□□□ 0.95
MSX1-201ENST00000382723 IGKV1D-37A0A075B6S9 117 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 TSPAN15O95858 294 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 HIST1H1BP16401 226 aaKnown RBP20.99■□□□□ 0.95
MSX1-201ENST00000382723 SRD5A1P18405 259 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 B2MP61769 119 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 GCSAMLQ5JQS6 135 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 KCNIP2Q9NS61 270 aa20.99■□□□□ 0.95
MSX1-201ENST00000382723 MFSD2BA6NFX1 497 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 RPL29P47914 159 aaKnown RBP20.98■□□□□ 0.95
MSX1-201ENST00000382723 ZNF90Q03938 601 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 CYP2G1PQ6ZSU1 146 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 TMEM86BQ8N661 226 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 NPFFR1Q9GZQ6 430 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 BAHCC1Q9P281 2608 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 A0A1B0GV50 99 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 DNAJC9-AS1A6NH13 148 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 YIF1AO95070 293 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 RHOGP84095 191 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 SCGB2A2Q13296 93 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 OR10G4Q8NGN3 311 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 OR10G9Q8NGN4 311 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 OR10G7Q8NGN6 311 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 OR4X1Q8NH49 305 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 PRSS22Q9GZN4 317 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 SLC39A9Q9NUM3 307 aa20.98■□□□□ 0.95
MSX1-201ENST00000382723 IGHV3-23P01764 117 aa20.97■□□□□ 0.95
MSX1-201ENST00000382723 MBP02144 154 aa20.97■□□□□ 0.95
MSX1-201ENST00000382723 ACOT6Q3I5F7 207 aaPredicted RBP20.97■□□□□ 0.95
MSX1-201ENST00000382723 DPPA3Q6W0C5 159 aa20.97■□□□□ 0.95
MSX1-201ENST00000382723 COMMD7Q86VX2 200 aa20.97■□□□□ 0.95
MSX1-201ENST00000382723 TCRBV4S1A1TA0A5B7 111 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 EIF3GO75821 320 aaKnown RBP eCLIP20.96■□□□□ 0.95
MSX1-201ENST00000382723 LINC00869P0C866 280 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 M6PRP20645 277 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 PRR20EP86478 221 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 PRR20CP86479 221 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 PRR20DP86480 221 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 PRR20BP86481 221 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 PRR20AP86496 221 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 RPP25LQ8N5L8 163 aaKnown RBP20.96■□□□□ 0.95
MSX1-201ENST00000382723 PFDN2Q9UHV9 154 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 CDC42EP3Q9UKI2 254 aa20.96■□□□□ 0.95
MSX1-201ENST00000382723 FOSL1P15407 271 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms