RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 CTHRC1Q96CG8 243 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 SFXN3Q9BWM7 321 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 ADCYAP1P18509 176 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 MALP21145 153 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 BTCP35070 178 aa9.09□□□□□ -0.95
CLCN4-202ENST00000380833 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.09□□□□□ -0.95
CLCN4-202ENST00000380833 LYNX1G3V0Z9 82 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 NCR2O95944 276 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 LYNX1P0DP58 116 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
CLCN4-202ENST00000380833 PCSK4Q6UW60 755 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 G3V4G9 280 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 ASPHD2Q6ICH7 369 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 ZNF721Q8TF20 911 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 TRAV24A0A0B4J272 114 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 CEACAM4O75871 244 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 OR5P3Q8WZ94 311 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 SVILO95425 2214 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 PTGDSP41222 190 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 CLEC19AQ6UXS0 136 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 CNTFRP26992 372 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 ZNRF1Q8ND25 227 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
CLCN4-202ENST00000380833 SAP30O75446 220 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 ATG4DQ86TL0 474 aaPredicted RBP9.07□□□□□ -0.96
CLCN4-202ENST00000380833 ZCCHC24Q8N2G6 241 aaKnown RBP9.07□□□□□ -0.96
CLCN4-202ENST00000380833 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
CLCN4-202ENST00000380833 TRAV13-1A0A0B4J241 112 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 TRBV5-5A0A0J9YX44 114 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 NPIPB11E5RHQ5 1161 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 BVES-AS1Q5T3Y7 98 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 FMC1Q96HJ9 113 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 PEX7O00628 323 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 NPCDR1Q9BY65 106 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 TRAV8-3A0A0A6YYJ7 113 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 PRR33A8MZF0 331 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 IGKV1D-33P01593 117 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 IGKV1-33P01594 117 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 SLC25A45Q8N413 288 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 NFAM1Q8NET5 270 aaPredicted RBP9.07□□□□□ -0.96
CLCN4-202ENST00000380833 IGKV1D-16P01601 117 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 TRIP11Q15643 1979 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 NABP1Q96AH0 204 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 VGLL1Q99990 258 aa9.07□□□□□ -0.96
CLCN4-202ENST00000380833 MRPS18CQ9Y3D5 142 aaKnown RBP9.07□□□□□ -0.96
CLCN4-202ENST00000380833 ZNF831Q5JPB2 1677 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 SLC25A20O43772 301 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 KIAA0040Q15053 153 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 COX14Q96I36 57 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 TFF1P04155 84 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 CCL20P78556 96 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 SRXN1Q9BYN0 137 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 SCN2AQ99250 2005 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 NPPCP23582 126 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 PTH2Q96A98 100 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
CLCN4-202ENST00000380833 NPIPB5A8MRT5 1133 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 MPV17P39210 176 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 IDI2-AS1Q9NZ38 188 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 CRYBA2P53672 197 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 C20orf173Q96LM9 149 aa9.06□□□□□ -0.96
CLCN4-202ENST00000380833 BSPH1Q075Z2 132 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 TRPM6Q9BX84 2022 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 IGLC7A0M8Q6 106 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 PSCAO43653 123 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 NANOS3P60323 173 aaKnown RBP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 STHQ8IWL8 128 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 ZNF501Q96CX3 271 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 TCRBV4S1A1TA0A5B7 111 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 PGLYRP1O75594 196 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 LAIR2Q6ISS4 152 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 WNT2P09544 360 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 C1QL2Q7Z5L3 287 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 SCN9AQ15858 1988 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 APOBEC3AP31941 199 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 FXYD7P58549 80 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 SRSF1Q07955 248 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLCN4-202ENST00000380833 Q0VG73 95 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 RPL39P5Q59GN2 51 aa9.05□□□□□ -0.96
CLCN4-202ENST00000380833 SIVA1O15304 175 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 FOXS1O43638 330 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 BGLAPP02818 100 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
CLCN4-202ENST00000380833 COLCA1Q6ZS62 124 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms