RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 IL11P20809 199 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 GAGE4Q13068 117 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 PIGYQ3MUY2 71 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 TM4SF20Q53R12 229 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 C11orf52Q96A22 123 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 LYZL4Q96KX0 146 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 KCNS2Q9ULS6 477 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 KLF13Q9Y2Y9 288 aaPredicted RBP6.15□□□□□ -1.43
CDKL5-201ENST00000379989 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.43
CDKL5-201ENST00000379989 HCFC1P51610 2035 aa6.15□□□□□ -1.43
CDKL5-201ENST00000379989 IGHV3-20A0A0C4DH32 117 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 C17orf51A8MQB3 221 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 K7ERJ3 54 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 RER1O15258 196 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 ZIC3O60481 467 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 SCGB2A1O75556 95 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 OR2J3O76001 311 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 MT-CO3P00414 261 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 CD59P13987 128 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 FOXI1Q12951 378 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 CENPWQ5EE01 88 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 ZNF645Q8N7E2 425 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 Q8TCH9 128 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 PHLDA1Q8WV24 401 aaPredicted RBP6.14□□□□□ -1.43
CDKL5-201ENST00000379989 ATP23Q9Y6H3 246 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 PIGBOS1A0A0B4J2F0 54 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 PMS2P5A8MQ11 134 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 PDCD6O75340 191 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 IGKV1-5P01602 117 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 LCNL1Q6ZST4 164 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 OR51H1Q8NH63 302 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 ZNF502Q8TBZ5 544 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 VCX2Q9H322 139 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 UNC13CQ8NB66 2214 aa6.14□□□□□ -1.43
CDKL5-201ENST00000379989 SMAD7O15105 426 aaKnown RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 EFNA2O43921 213 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 RPS16P62249 146 aaKnown RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 KRTAP27-1Q3LI81 207 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 ZFAND6Q6FIF0 208 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 OR4X2Q8NGF9 303 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 OR9G4Q8NGQ1 327 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PTH2Q96A98 100 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PROK2Q9HC23 129 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PRDM6Q9NQX0 595 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 DEPPQ9NTK1 212 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 DYSFO75923 2080 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 APOMO95445 188 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 FXYD2P54710 66 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 B3GALT5-AS1P59052 145 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 RASL11AQ6T310 242 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 GLMPQ8WWB7 406 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 POLDIP2Q9Y2S7 368 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 CEP290O15078 2479 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 CXorf1O96002 111 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 CCL4P13236 92 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PPIFP30405 207 aaKnown RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 MFAP2P55001 183 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 C3AR1Q16581 482 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 GAGE13Q4V321 117 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 WIPI1Q5MNZ9 446 aaPredicted RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 AMTNQ6UX39 209 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 IL1F10Q8WWZ1 152 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 FAM168AQ92567 244 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 CHCHD1Q96BP2 118 aaKnown RBP6.13□□□□□ -1.43
CDKL5-201ENST00000379989 PCSK5Q92824 1860 aa6.13□□□□□ -1.43
CDKL5-201ENST00000379989 E9PLD3 99 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TUSC2O75896 110 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 NCR2O95944 276 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 SCTP09683 121 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 IBA57Q5T440 356 aaKnown RBP6.12□□□□□ -1.43
CDKL5-201ENST00000379989 ASPHD1Q5U4P2 390 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 CARD17Q5XLA6 110 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TMEM211Q6ICI0 200 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TRAT1Q6PIZ9 186 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 PIP4P1Q86T03 277 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 PRELID3AQ96N28 172 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 ARRDC1-AS1Q9H2J1 176 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TMEM133Q9H2Q1 129 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TANC2Q9HCD6 1990 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 C3orf80F5H4A9 247 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 MYF5P13349 255 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 COL8A2P25067 703 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 EDDM3BP56851 147 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TCTAP57738 103 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TAS2R45P59539 299 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 RTL8BQ17RB0 113 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 Q6ZR03 302 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 TEX29Q8N6K0 151 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 ADTRPQ96IZ2 230 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 SSBP3Q9BWW4 388 aaPredicted RBP6.12□□□□□ -1.43
CDKL5-201ENST00000379989 RP1P56715 2156 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 IGKV1-27A0A075B6S5 117 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 A0A1B0GWB2 263 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 FAM90A10PA6NDY2 464 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 FAM90A18PA6NE21 464 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 FAM90A16PA6NEW6 464 aa6.12□□□□□ -1.43
CDKL5-201ENST00000379989 FAM90A20PA6NIJ5 464 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms