RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NDPQ00604 133 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 HABP2Q14520 560 aaPredicted RBP6.58□□□□□ -1.36
CKAP2-203ENST00000378037 TIGITQ495A1 244 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 TCF23Q7RTU1 214 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 Q8TCH9 128 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 GLMPQ8WWB7 406 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 SRSF12Q8WXF0 261 aaKnown RBP6.58□□□□□ -1.36
CKAP2-203ENST00000378037 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 TEX50A0A1B0GTY4 177 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 PGPA6NDG6 321 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 YPEL1O60688 119 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 IGLV2-14P01704 120 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 GALR1P47211 349 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 RHOBP62745 196 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 C16orf82Q7Z2V1 217 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 VMO1Q7Z5L0 202 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 BAGE2Q86Y30 109 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 YPEL2Q96QA6 119 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 WNT10AQ9GZT5 417 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 SEBOXQ9HB31 216 aaPredicted RBP6.58□□□□□ -1.36
CKAP2-203ENST00000378037 CBLN4Q9NTU7 201 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 C15orf62A8K5M9 175 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 MST1LQ2TV78 715 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 TMEM95Q3KNT9 176 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 C10orf113Q5VZT2 155 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 TREML4Q6UXN2 200 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 PRNTQ86SH4 94 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 SGMS2Q8NHU3 365 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 DPM3Q9P2X0 92 aa6.58□□□□□ -1.36
CKAP2-203ENST00000378037 PMCHP20382 165 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 GNG4P50150 75 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 LOXL3P58215 753 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 SRSF2Q01130 221 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 HEPN1Q6WQI6 88 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 OR10D4PQ8NGN7 298 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 ZNF596Q8TC21 504 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 CORO2AQ92828 525 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 FAM210BQ96KR6 192 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 NOL4LQ96MY1 436 aaPredicted RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 RNASE7Q9H1E1 156 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 RABAC1Q9UI14 185 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 TIMM9Q9Y5J7 89 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 CTXND1A0A1B0GTU2 59 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 A8MXK9 166 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 PPIFP30405 207 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 IER3P46695 156 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 RAB5CP51148 216 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 RPL15P61313 204 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 RELBQ01201 579 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 PPP1R27Q86WC6 154 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 OR2D3Q8NGH3 330 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 HRNRQ86YZ3 2850 aaPredicted RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 TRBV23-1A0A0A0MS06 115 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 J3QW42 95 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 SRP14P37108 136 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 CEACAM3P40198 252 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 BRWD1-AS2P59051 145 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 CLEC19AQ6UXS0 136 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 LSM10Q969L4 123 aaKnown RBP6.57□□□□□ -1.36
CKAP2-203ENST00000378037 ADTRPQ96IZ2 230 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 SMIM8Q96KF7 97 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 VAX2Q9UIW0 290 aa6.57□□□□□ -1.36
CKAP2-203ENST00000378037 COL6A5A8TX70 2615 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 LRRC75BQ2VPJ9 315 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 ST6GALNAC3Q8NDV1 305 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 VSTM2AQ8TAG5 236 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 C12orf57Q99622 126 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 SEC11CQ9BY50 192 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 CTDSP1Q9GZU7 261 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 TRAV20A0A0B4J274 112 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 IGHV1-3A0A0C4DH29 117 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 C15orf61A6NNL5 157 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 H0YJW9 148 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 M0R3E3 92 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 RNF224P0DH78 156 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 SAA4P35542 130 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 EXOC3-AS1Q8N2X6 119 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 PAXXQ9BUH6 204 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 RYDENQ9NUL5 291 aaKnown RBP6.56□□□□□ -1.36
CKAP2-203ENST00000378037 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 PPP1R2P9O14990 202 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 SPRY2O43597 315 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 GZMBP10144 247 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 LGALS7P47929 136 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
CKAP2-203ENST00000378037 ZNF124Q15973 351 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 FAM120AOSQ5T036 256 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 GFI1BQ5VTD9 330 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 C1QL4Q86Z23 238 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 IL22RA2Q969J5 263 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms