RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SPAG17Q6Q759 2223 aa7.26□□□□□ -1.25
PCDH9-202ENST00000377865 A0A1W2PS18 150 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 F5H697 171 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 GNG5P63218 68 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 OR9G4Q8NGQ1 327 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 OR1N2Q8NGR9 330 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 MGPP08493 103 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 C5orf24Q7Z6I8 188 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 IGHV3-72A0A0B4J1Y9 119 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 KIR2DL5BA0A0G2JN68 375 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 KIR2DL5BA0A0G2JPC4 375 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 C7orf71A4D174 169 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 TDGF1P13385 188 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 ZNF841Q6ZN19 808 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 KIR2DL5AQ8N109 375 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 DEFB124Q8NES8 71 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 GFRA4Q9GZZ7 299 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 VCX2Q9H322 139 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 RALGAPA1Q6GYQ0 2036 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 A0A1B0GWJ7 208 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 LINC00473A8K010 186 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 PSPNO60542 156 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 IGKV1-39P01597 117 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 IGKV1D-39P04432 117 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 ARID1AO14497 2285 aa7.25□□□□□ -1.25
PCDH9-202ENST00000377865 PVRIGQ6DKI7 326 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 SRRM5B3KS81 715 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 M0QZ24 198 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 HBDP02042 147 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 CDKN1AP38936 164 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 RSPO1Q2MKA7 263 aaPredicted RBP7.24□□□□□ -1.25
PCDH9-202ENST00000377865 DEFB123Q8N688 67 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 RNF138Q8WVD3 245 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 CLEC5AQ9NY25 188 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 H3BTX0 84 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 PYYP10082 97 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 RPL15P61313 204 aaKnown RBP7.24□□□□□ -1.25
PCDH9-202ENST00000377865 PEAR1Q5VY43 1037 aaPredicted RBP7.24□□□□□ -1.25
PCDH9-202ENST00000377865 Q6ZWC4 215 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 HAPLN4Q86UW8 402 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 FBXL7Q9UJT9 491 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 KRTAP27-1Q3LI81 207 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
PCDH9-202ENST00000377865 COQ2Q96H96 371 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 METTL26Q96S19 204 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 F2RL2O00254 374 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 DLX1P56177 255 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 VWC2Q2TAL6 325 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 C8orf46Q8TAG6 207 aa7.24□□□□□ -1.25
PCDH9-202ENST00000377865 LMO1P25800 156 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 LDLRAD2Q5SZI1 272 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 SAMD13Q5VXD3 122 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 TTC9CQ8N5M4 171 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 H3BUT2 72 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 IL4P05112 153 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 C11orf52Q96A22 123 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 H3BVH4 76 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 KLK10O43240 276 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 IL18BPO95998 194 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 UNQ5815/PRO19632Q6UWF5 114 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 MUC15Q8N387 334 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 CD177Q8N6Q3 437 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 FAM216BQ8N7L0 139 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 RALYQ9UKM9 306 aaKnown RBP7.23□□□□□ -1.25
PCDH9-202ENST00000377865 SYS1-DBNDD2H3BUS1 97 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 IGKV1D-33P01593 117 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 IGKV1-33P01594 117 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 ZNF329Q86UD4 541 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 FER1L6-AS1Q8NA97 138 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 TRGV9Q99603 122 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 SPRR3Q9UBC9 169 aa7.23□□□□□ -1.25
PCDH9-202ENST00000377865 CD5LO43866 347 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 FOXG1P55316 489 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-202ENST00000377865 OR10J6PQ8NGY7 276 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 LTBP2Q14767 1821 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 ARHGEF17Q96PE2 2063 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-202ENST00000377865 IGHV1-18A0A0C4DH31 117 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 SMIM27A0A1W2PRY6 76 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 CA1P00915 261 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-202ENST00000377865 PPBPP02775 128 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 ID1P41134 155 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 TMUB1Q9BVT8 246 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 FAM71F2Q6NXP2 309 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 ST6GALNAC3Q8NDV1 305 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 SLC25A2Q9BXI2 301 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 ZNF492Q9P255 531 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 V9GYV3 84 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 HEATR5AQ86XA9 2040 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 PPIAL4CA0A0B4J2A2 164 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 IGHV3-48P01763 117 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 PPIAL4GP0DN37 164 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 IGLC3P0DOY3 106 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 ERVK11-1P61568 191 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 Q0VFX4 171 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms