RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 FSTP19883 344 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 HAMPP81172 84 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 OR10W1Q8NGF6 305 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 TTC3P53804 2025 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 HIGD1CA8MV81 97 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
RTN3-206ENST00000377819 PVRIGQ6DKI7 326 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 RCHY1Q96PM5 261 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 KLK13Q9UKR3 277 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 Q9H3A6 140 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 OTORQ9NRC9 128 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 MRPS18BQ9Y676 258 aaKnown RBP8.97□□□□□ -0.97
RTN3-206ENST00000377819 NDUFS5O43920 106 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 IGKCP01834 107 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 NMBP08949 121 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 GAGE2AQ6NT46 116 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 CRIM1Q9NZV1 1036 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 NOVP48745 357 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 XAF1Q6GPH4 301 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 MYEOVQ96EZ4 313 aa8.97□□□□□ -0.97
RTN3-206ENST00000377819 LRRC37A2A6NM11 1700 aa8.96□□□□□ -0.97
RTN3-206ENST00000377819 CD33P20138 364 aa8.96□□□□□ -0.97
RTN3-206ENST00000377819 IFITM2Q01629 132 aa8.96□□□□□ -0.97
RTN3-206ENST00000377819 HSD52Q0P140 79 aa8.96□□□□□ -0.97
RTN3-206ENST00000377819 PLAC1Q9HBJ0 212 aa8.96□□□□□ -0.97
RTN3-206ENST00000377819 A0A1B0GTL3 188 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 IZUMO1RA6ND01 250 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 CHKB-CPT1BH3BT56 60 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 NGFRP08138 427 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 UCP1P25874 307 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 ERCC8Q13216 396 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 TAL2Q16559 108 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 SPRED2Q7Z698 418 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 RMI2Q96E14 147 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 RNF114Q9Y508 228 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 IQCF6A8MYZ5 107 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 NBR2O15453 112 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 C9orf153Q5TBE3 101 aa8.96□□□□□ -0.98
RTN3-206ENST00000377819 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 DANCRP0C864 163 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 RHOGP84095 191 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 SAMD5Q5TGI4 173 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 C9orf40Q8IXQ3 194 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 SHISA4Q96DD7 197 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 RCC1LQ96I51 464 aaKnown RBP8.95□□□□□ -0.98
RTN3-206ENST00000377819 REPIN1Q9BWE0 567 aaKnown RBP8.95□□□□□ -0.98
RTN3-206ENST00000377819 CCDC168Q8NDH2 2452 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 RNF125Q96EQ8 232 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 CXCL16Q9H2A7 254 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 WNT2P09544 360 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 IGFBP2P18065 325 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 TGIF1Q15583 401 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 ZXDCQ2QGD7 858 aaPredicted RBP8.95□□□□□ -0.98
RTN3-206ENST00000377819 POC1AQ8NBT0 407 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 COX14Q96I36 57 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 GP6Q9HCN6 339 aa8.95□□□□□ -0.98
RTN3-206ENST00000377819 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 IGHG3P01860 377 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 PGFP49763 221 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 RIPPLY3P57055 190 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 ANXA2RQ3ZCQ2 193 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 ASPHD2Q6ICH7 369 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 MSRB3Q8IXL7 192 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 SIGLEC12Q96PQ1 595 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 DOCK7Q96N67 2140 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 LCTP09848 1927 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 PLA2G10O15496 165 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 CISD3P0C7P0 127 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 Q6ZT83 130 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 TMEM144Q7Z5S9 345 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 PLA2G2FQ9BZM2 168 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 WDR81Q562E7 1941 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 IMMP1LQ96LU5 166 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 IMMP2LQ96T52 175 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 F8P00451 2351 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 TRAV5A0A0B4J249 113 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 A0A1W2PRS3 328 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 ZP1P60852 638 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 PAX8Q06710 450 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 C1orf100Q5SVJ3 147 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
RTN3-206ENST00000377819 HLA-DQB1P01920 261 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 EGR2P11161 476 aaPredicted RBP8.93□□□□□ -0.98
RTN3-206ENST00000377819 NPC2P61916 151 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 PMVKQ15126 192 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 ZNF660Q6AZW8 331 aaPredicted RBP8.93□□□□□ -0.98
RTN3-206ENST00000377819 GPHA2Q96T91 129 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 CHAC1Q9BUX1 264 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 VCYO14598 125 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 OR9G9P0C7N8 305 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 PI4KAP42356 2102 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms