RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 THAP8Q8NA92 274 aa14.02□□□□□ -0.16
CTTN-203ENST00000376561 WNT10AQ9GZT5 417 aa14.02□□□□□ -0.16
CTTN-203ENST00000376561 SEPSECSQ9HD40 501 aaKnown RBP14.02□□□□□ -0.16
CTTN-203ENST00000376561 HIF1ANQ9NWT6 349 aa14.02□□□□□ -0.16
CTTN-203ENST00000376561 CENPEQ02224 2701 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 POLQO75417 2590 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 IGKV1D-37A0A075B6S9 117 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 STAG3L2P0CL84 134 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 STAG3L3P0CL85 134 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 NPBWR1P48145 328 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 RHOBP62745 196 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 CYP2G1PQ6ZSU1 146 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 CYB561D1Q8N8Q1 229 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 ARPC1AQ92747 370 aa14.02□□□□□ -0.17
CTTN-203ENST00000376561 BEX4Q9NWD9 120 aaPredicted RBP14.02□□□□□ -0.17
CTTN-203ENST00000376561 MT-CO2P00403 227 aa14.01□□□□□ -0.17
CTTN-203ENST00000376561 DEFB113Q30KQ7 82 aa14.01□□□□□ -0.17
CTTN-203ENST00000376561 IGHV4-38-2P0DP08 117 aa14□□□□□ -0.17
CTTN-203ENST00000376561 PSMB3P49720 205 aa14□□□□□ -0.17
CTTN-203ENST00000376561 CEBPGP53567 150 aa14□□□□□ -0.17
CTTN-203ENST00000376561 NDPQ00604 133 aa14□□□□□ -0.17
CTTN-203ENST00000376561 TMEM116Q8NCL8 245 aa14□□□□□ -0.17
CTTN-203ENST00000376561 CLRN3Q8NCR9 226 aa14□□□□□ -0.17
CTTN-203ENST00000376561 MANBALQ9NQG1 85 aa14□□□□□ -0.17
CTTN-203ENST00000376561 IGHV3-21A0A0B4J1V1 117 aa14□□□□□ -0.17
CTTN-203ENST00000376561 TRAV20A0A0B4J274 112 aa14□□□□□ -0.17
CTTN-203ENST00000376561 TCRBV4S1A1TA0A5B7 111 aa14□□□□□ -0.17
CTTN-203ENST00000376561 ARL14EPLP0DKL9 152 aa14□□□□□ -0.17
CTTN-203ENST00000376561 FAM78BQ5VT40 261 aa14□□□□□ -0.17
CTTN-203ENST00000376561 SPATA31B1PQ5VZV4 182 aa14□□□□□ -0.17
CTTN-203ENST00000376561 SREK1IP1Q8N9Q2 155 aaPredicted RBP14□□□□□ -0.17
CTTN-203ENST00000376561 GATAD1Q8WUU5 269 aa14□□□□□ -0.17
CTTN-203ENST00000376561 C22orf15Q8WYQ4 148 aa14□□□□□ -0.17
CTTN-203ENST00000376561 CSMD1Q96PZ7 3565 aa14□□□□□ -0.17
CTTN-203ENST00000376561 GATA3P23771 443 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 ZNF90Q03938 601 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 ASPHD1Q5U4P2 390 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 MAP1AP78559 2803 aaPredicted RBP13.99□□□□□ -0.17
CTTN-203ENST00000376561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.172e-9■■■■□ 25
CTTN-203ENST00000376561 IGHV7-81A0A0B4J1V7 117 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 A0A0U1RQK1 487 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 CXorf1O96002 111 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 TAGLN2P37802 199 aaKnown RBP13.99□□□□□ -0.17
CTTN-203ENST00000376561 MEF2BQ02080 365 aaPredicted RBP13.99□□□□□ -0.17
CTTN-203ENST00000376561 SPNS3Q6ZMD2 512 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 LRRC75A-AS1Q8N1F1 130 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 LINC01356Q8N9X3 169 aa13.99□□□□□ -0.17
CTTN-203ENST00000376561 I3L2K1 104 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 HLA-DRB1P01911 266 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 CD81P60033 236 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 OR1L6Q8NGR2 347 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 RASL11BQ9BPW5 248 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 C19orf24Q9BVV8 132 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 MEGF9Q9H1U4 602 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 TENM4Q6N022 2769 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 DOPEY2Q9Y3R5 2298 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 ABCA1O95477 2261 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 FAM74A7A6NL05 159 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 NPIPB5A8MRT5 1133 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 DNASE2O00115 360 aaPredicted RBP13.98□□□□□ -0.17
CTTN-203ENST00000376561 PAGE4O60829 102 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 SELENOTP62341 195 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 FAM74A3Q4VXF1 159 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 FUT9Q9Y231 359 aa13.98□□□□□ -0.17
CTTN-203ENST00000376561 PSMB11A5LHX3 300 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 TSPAN9O75954 239 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 AVPP01185 164 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 OR5G3P0C626 314 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 LOXL1Q08397 574 aaPredicted RBP13.97□□□□□ -0.17
CTTN-203ENST00000376561 MIR17HGQ75NE6 70 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 TMEM37Q8WXS4 190 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 TRGV9Q99603 122 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 ABCA12Q86UK0 2595 aa13.97□□□□□ -0.17
CTTN-203ENST00000376561 NUPL2O15504 423 aaKnown RBP13.96□□□□□ -0.17
CTTN-203ENST00000376561 EGR2P11161 476 aaPredicted RBP13.96□□□□□ -0.17
CTTN-203ENST00000376561 FAM90A2PQ658T7 463 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 HSPB9Q9BQS6 159 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 PUS1Q9Y606 427 aaKnown RBP eCLIP13.96□□□□□ -0.175e-6■■■□□ 15.6
CTTN-203ENST00000376561 K7EIM0 57 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 KLF17Q5JT82 389 aaPredicted RBP13.96□□□□□ -0.17
CTTN-203ENST00000376561 TTC9CQ8N5M4 171 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 MAPK1IP1LQ8NDC0 245 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 NANPQ8TBE9 248 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 PIFOQ8TCI5 191 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 PSMG3-AS1Q96PY0 264 aa13.96□□□□□ -0.17
CTTN-203ENST00000376561 CELSR1Q9NYQ6 3014 aa13.96□□□□□ -0.18
CTTN-203ENST00000376561 RNF223E7ERA6 249 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 AWAT1Q58HT5 328 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 Q5PR19 223 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 TMEM88Q6PEY1 159 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 OR4X1Q8NH49 305 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 C20orf24Q9BUV8 137 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 H3BQ15 152 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 M0R036 132 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 GCHFRP30047 84 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 AKIRIN2Q53H80 203 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 SUN5Q8TC36 379 aa13.95□□□□□ -0.18
CTTN-203ENST00000376561 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms