RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 WT1P19544 449 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 Q6ZWC4 215 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 LINC00305Q7Z4B0 112 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 WDR73Q6P4I2 378 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 MUC15Q8N387 334 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 Q8TCH9 128 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TCTEX1D1Q8N7M0 179 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 GP6Q9HCN6 339 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 DPRXA6NFQ7 191 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 YPEL1O60688 119 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 HTR1DP28221 377 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ATMQ13315 3056 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CHD8Q9HCK8 2581 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 FAM90A27PA6NNH2 459 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 K7EN84 100 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 P01737 135 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 NUTF2P61970 127 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 DIAPH2-AS1Q14236 149 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ARHGAP32A7KAX9 2087 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ZNF138P52744 262 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ATG2AQ2TAZ0 1938 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 A0A1W2PN81 502 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SRRM4A7MD48 611 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 GLRXP35754 106 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TMEM177Q53S58 311 aa11.79□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PPIAL4EA0A075B759 164 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 HIGD1CA8MV81 97 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PPIAL4DF5H284 164 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PPIAL4FP0DN26 164 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 MAS1LP35410 378 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 INSIG2Q9Y5U4 225 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 EXPH5Q8NEV8 1989 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TEX50A0A1B0GTY4 177 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 C20orf202A1L168 122 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 NCBP2LA6PVI3 153 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 IGKV3-15P01624 115 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 RPEQ96AT9 228 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 WASHC3Q9Y3C0 194 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 C15orf65H3BRN8 121 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 FAM168AQ92567 244 aa11.78□□□□□ -0.52
TNFRSF1B-201ENST00000376259 FOXL1Q12952 345 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ETFRF1Q6IPR1 90 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FBXL7Q9UJT9 491 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ISLRO14498 428 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CORTO00230 105 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGHV1-46P01743 117 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 GOLT1AQ6ZVE7 132 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 UPK2O00526 184 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NPSP0C0P6 89 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR4C5Q8NGB2 326 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
TNFRSF1B-201ENST00000376259 J3QW42 95 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 AMY1AP04745 511 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CD40P25942 277 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 MAP1AP78559 2803 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ACACBO00763 2458 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 J3KRW8 73 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 DLL1O00548 723 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms