RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 DUX5Q96PT3 197 aa14.77□□□□□ -0.04
PTPDC1-202ENST00000375360 GRNP28799 593 aaKnown RBP14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 A8MXK9 166 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 EBLN2Q6P2I7 272 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 C11orf44Q8N8P7 122 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 MRPL32Q9BYC8 188 aaKnown RBP14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 SLC17A3O00476 420 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 CD69Q07108 199 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 RNASEH2CQ8TDP1 164 aaKnown RBP14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 TRBV6-6A0A0A6YYG2 114 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 FOXI3A8MTJ6 420 aaPredicted RBP14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 SELENOKQ9Y6D0 94 aa14.76□□□□□ -0.05
PTPDC1-202ENST00000375360 RPL29P47914 159 aaKnown RBP14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 DLX6P56179 175 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 TWIST1Q15672 202 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 COX19Q49B96 90 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 SETD2Q9BYW2 2564 aaPredicted RBP14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 CYYR1Q96J86 154 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 WNT2P09544 360 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 RNF224P0DH78 156 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 PYYP10082 97 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 RELQ04864 619 aaPredicted RBP14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 WDR83OSQ9Y284 106 aa14.75□□□□□ -0.05
PTPDC1-202ENST00000375360 WIPF3A6NGB9 483 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 VMO1Q7Z5L0 202 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MBNL3Q9NUK0 354 aaKnown RBP14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 ZFYVE26Q68DK2 2539 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 IGHV1-3A0A0C4DH29 117 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MUC21A0A0G2JKD1 596 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MUC21A0A140T8X8 626 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MUC21Q5SSG8 566 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 CLDND2Q8NHS1 167 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 YAE1D1Q9NRH1 226 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MAPK1IP1LQ8NDC0 245 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 NEU1Q99519 415 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 CYTL1Q9NRR1 136 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 MEOX2P50222 304 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 DKK4Q9UBT3 224 aa14.74□□□□□ -0.05
PTPDC1-202ENST00000375360 USP9YO00507 2555 aaPredicted RBP14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 MLANAQ16655 118 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 ZNF585BQ52M93 769 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 KLHDC1Q8N7A1 406 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 TEX45Q8NA69 505 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 PGPEP1LA6NFU8 196 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 TCAPO15273 167 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 RNF166Q96A37 237 aaPredicted RBP14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 CFPP27918 469 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 RHOGP84095 191 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 DGAT2L7PQ6IED9 249 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 TREML4Q6UXN2 200 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 IGLV1-44P01699 117 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 HIST1H1AQ02539 215 aaPredicted RBP14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 SFRP2Q96HF1 295 aa14.73□□□□□ -0.05
PTPDC1-202ENST00000375360 HIST1H2BAQ96A08 127 aa14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 HIVEP2P31629 2446 aa14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 SLC25A48Q6ZT89 311 aaKnown RBP14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 GSX1Q9H4S2 264 aaPredicted RBP14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 BET1LQ9NYM9 111 aa14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 SIAH2O43255 324 aa14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 PRSS8Q16651 343 aa14.72□□□□□ -0.05
PTPDC1-202ENST00000375360 A0A1W2PRX2 142 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 DYSFO75923 2080 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 TCTAP57738 103 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 TNFRSF14Q92956 283 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 GRIFINA4D1Z8 144 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 GPX4P36969 197 aaPredicted RBP14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 EFNB3Q15768 340 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 TMEM116Q8NCL8 245 aa14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 YTHDF2Q9Y5A9 579 aaKnown RBP14.71□□□□□ -0.05
PTPDC1-202ENST00000375360 TRAV5A0A0B4J249 113 aa14.71□□□□□ -0.06
PTPDC1-202ENST00000375360 GPX1P07203 203 aa14.71□□□□□ -0.06
PTPDC1-202ENST00000375360 UQCRFS1P47985 274 aa14.71□□□□□ -0.06
PTPDC1-202ENST00000375360 Q6ZS49 121 aa14.71□□□□□ -0.06
PTPDC1-202ENST00000375360 USP9XQ93008 2570 aaPredicted RBP14.71□□□□□ -0.06
PTPDC1-202ENST00000375360 DENND4AQ7Z401 1863 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 H0YJW9 148 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 CBLN1P23435 193 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 RPP25LQ8N5L8 163 aaKnown RBP14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 OR8A1Q8NGG7 326 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 GPR61Q9BZJ8 451 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 LMO1P25800 156 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 ERVK11-1P61568 191 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 IGFL2Q6UWQ7 119 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 IGLV3-1P01715 115 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 GNG5P63218 68 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 RELBQ01201 579 aa14.7□□□□□ -0.06
PTPDC1-202ENST00000375360 NDUFS7O75251 213 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 CX3CL1P78423 397 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 VN1R17PQ8TDU5 208 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 MRPL18Q9H0U6 180 aaKnown RBP14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 PTTG1IPP53801 180 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 PSG9Q00887 426 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 MMP23AO75900 390 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 HNRNPA3P51991 378 aaKnown RBP14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 TPTE2P1Q5T6R2 138 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 GGTLC1Q9BX51 225 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 TRAV20A0A0B4J274 112 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 A0A0G2JLM5 398 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 PEX7O00628 323 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms