RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PNKDQ8N490 385 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 RNASEH2CQ8TDP1 164 aaKnown RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 RCC1LQ96I51 464 aaKnown RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 ST20Q9HBF5 79 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 PLAC1Q9HBJ0 212 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 KLHDC2Q9Y2U9 406 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 FNDC1Q4ZHG4 1894 aaPredicted RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 TRAV24A0A0B4J272 114 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 TMEM14DPA8MWL7 114 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 SRP19P09132 144 aaKnown RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 PAX2Q02962 417 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 RNF182Q8N6D2 247 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 OR11H4Q8NGC9 324 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 CHCHD1Q96BP2 118 aaKnown RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 IMMP2LQ96T52 175 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 ASCL2Q99929 193 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 KLK15Q9H2R5 256 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 SDF2L1Q9HCN8 221 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 INAFM1C9JVW0 142 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 FBLN7Q53RD9 439 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 CT83Q5H943 113 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 OR10J3Q5JRS4 329 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 FAM74A4Q5TZK3 123 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 ORAOV1Q8WV07 137 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 BPESC1Q9GZL8 116 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 NCOR1P1Q9H4R4 102 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 SEMA5BQ9P283 1151 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 A0A1W2PPE3 182 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 GGTLC3B5MD39 225 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 LYNX1G3V0Z9 82 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 H3BUT2 72 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 TM4SF5O14894 197 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 HBDP02042 147 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 MSMBP08118 114 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 LYNX1P0DP58 116 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 GLRXP35754 106 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 IFI27P40305 119 aaPredicted RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 DMRTC2Q8IXT2 367 aaPredicted RBP5.29□□□□□ -1.56
PTPN3-202ENST00000374541 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
PTPN3-202ENST00000374541 PDCD11Q14690 1871 aaKnown RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 UPK3AO75631 287 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 PLAUP00749 431 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 THY1P04216 161 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ZNF708P17019 499 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 KIAA1644Q3SXP7 199 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 OTORQ9NRC9 128 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 MYO16Q9Y6X6 1858 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 DPM2O94777 84 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 NBEAP1P0C6P0 100 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 LEPP41159 167 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 GAGE2EQ4V326 116 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 IGFL3Q6UXB1 125 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 LINC00305Q7Z4B0 112 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ATP5L2Q7Z4Y8 100 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 GTF3AQ92664 365 aaKnown RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 NRGNQ92686 78 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ZNF385AQ96PM9 386 aaKnown RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 SPRR3Q9UBC9 169 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 GAGE2DQ9UEU5 116 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 SIRT4Q9Y6E7 314 aaPredicted RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 TICRRQ7Z2Z1 1910 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 APOMO95445 188 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 GATA3P23771 443 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ZNF672Q499Z4 452 aaPredicted RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 TMEM86BQ8N661 226 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 FER1L6-AS1Q8NA97 138 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 IMMP1LQ96LU5 166 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 PCNX2A6NKB5 2137 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 FOXI3A8MTJ6 420 aaPredicted RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 H2BFSP57053 126 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 RHOGP84095 191 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ATOH7Q8N100 152 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 OSTCQ9NRP0 149 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 DCHS1Q96JQ0 3298 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 AKAP6Q13023 2319 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 A0A1W2PPV9 198 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
PTPN3-202ENST00000374541 IFITM2Q01629 132 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 SLC25A53Q5H9E4 307 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 ABHD12Q8N2K0 398 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 RTN4RQ9BZR6 473 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 FRMPD3Q5JV73 1810 aa5.28□□□□□ -1.56
PTPN3-202ENST00000374541 A0A0G2JMM0 328 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 A0A1W2PPB8 328 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 A0A1W2PRS3 328 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 KIR3DP1A8MWS1 328 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 CKS1BP61024 79 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 SRSF1Q07955 248 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPN3-202ENST00000374541 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 CRYGSP22914 178 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 UCP1P25874 307 aa5.27□□□□□ -1.57
PTPN3-202ENST00000374541 SRSF4Q08170 494 aaKnown RBP5.27□□□□□ -1.57
PTPN3-202ENST00000374541 DTX1Q86Y01 620 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms