RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 BEX4Q9NWD9 120 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-209ENST00000373589 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 ANKRD17O75179 2603 aaKnown RBP12.45□□□□□ -0.42
HDAC8-209ENST00000373589 TRAV40A0A0B4J280 105 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 IGHV3-48P01763 117 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 GATA2P23769 480 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-209ENST00000373589 NDPQ00604 133 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 WNT10AQ9GZT5 417 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 SEPSECSQ9HD40 501 aaKnown RBP12.44□□□□□ -0.42
HDAC8-209ENST00000373589 MANBALQ9NQG1 85 aa12.44□□□□□ -0.42
HDAC8-209ENST00000373589 CELSR1Q9NYQ6 3014 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 TRAV20A0A0B4J274 112 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 J3QKU1 62 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 GATA3P23771 443 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
HDAC8-209ENST00000373589 PSMB3P49720 205 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 RND2P52198 227 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 RHOBP62745 196 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 ARPC1AQ92747 370 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
HDAC8-209ENST00000373589 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 CSMD1Q96PZ7 3565 aa12.43□□□□□ -0.42
HDAC8-209ENST00000373589 TCRBV4S1A1TA0A5B7 111 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 I3L2K1 104 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 DNASE2O00115 360 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-209ENST00000373589 MT-CO2P00403 227 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 HLA-DRB1P01911 266 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 IGHV4-38-2P0DP08 117 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 SPATA31B1PQ5VZV4 182 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 MEGF9Q9H1U4 602 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 PSMB11A5LHX3 300 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 NDUFS6O75380 124 aaKnown RBP12.42□□□□□ -0.42
HDAC8-209ENST00000373589 TSPAN9O75954 239 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 CXorf1O96002 111 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 CD81P60033 236 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-209ENST00000373589 BRD3OSQ6XYD6 125 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 OR1L6Q8NGR2 347 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 GATAD1Q8WUU5 269 aa12.42□□□□□ -0.42
HDAC8-209ENST00000373589 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 OR5G3P0C626 314 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 EGR2P11161 476 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-209ENST00000373589 SELENOTP62341 195 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 ZNF90Q03938 601 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 FAM90A2PQ658T7 463 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 SPNS3Q6ZMD2 512 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 TTC9CQ8N5M4 171 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 LINC01356Q8N9X3 169 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 PIFOQ8TCI5 191 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 TRGV9Q99603 122 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 FUT9Q9Y231 359 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 APCP25054 2843 aa12.41□□□□□ -0.42
HDAC8-209ENST00000373589 NBPF19A0A087WUL8 3843 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 A0A0U1RQK1 487 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 LOXL1Q08397 574 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-209ENST00000373589 FAM74A3Q4VXF1 159 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 FAM78BQ5VT40 261 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 IQCF2Q8IXL9 164 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 TMEM37Q8WXS4 190 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 C22orf15Q8WYQ4 148 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 PSMG3-AS1Q96PY0 264 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
HDAC8-209ENST00000373589 IGHV3-21A0A0B4J1V1 117 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 K7EIM0 57 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 PAGE4O60829 102 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 AVPP01185 164 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 KLF17Q5JT82 389 aaPredicted RBP12.4□□□□□ -0.43
HDAC8-209ENST00000373589 RASL11BQ9BPW5 248 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.43
HDAC8-209ENST00000373589 CEBPGP53567 150 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 AWAT1Q58HT5 328 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 OR4X1Q8NH49 305 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 NANPQ8TBE9 248 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 HSPB9Q9BQS6 159 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.439e-10■■■■■ 36.7
HDAC8-209ENST00000373589 ZFHX3Q15911 3703 aa12.39□□□□□ -0.43
HDAC8-209ENST00000373589 IGLV11-55A0A075B6I3 123 aa12.38□□□□□ -0.43
HDAC8-209ENST00000373589 TMEM250H0YL14 139 aa12.38□□□□□ -0.43
HDAC8-209ENST00000373589 H3BQ15 152 aa12.38□□□□□ -0.43
HDAC8-209ENST00000373589 GCHFRP30047 84 aa12.38□□□□□ -0.43
HDAC8-209ENST00000373589 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-209ENST00000373589 MBD6Q96DN6 1003 aa12.38□□□□□ -0.43
HDAC8-209ENST00000373589 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
HDAC8-209ENST00000373589 PUS1Q9Y606 427 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC8-209ENST00000373589 NUPL2O15504 423 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms