RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 METTL26Q96S19 204 aa9.45□□□□□ -0.9
TRAPPC3-201ENST00000373159 A0A0B4J293 547 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 CORTO00230 105 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 CLN5O75503 358 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 C4BPBP20851 252 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 RPL5P46777 297 aaKnown RBP9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.95e-9■□□□□ 9.5
TRAPPC3-201ENST00000373159 SPINK9Q5DT21 86 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 POM121L12Q8N7R1 296 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 STXBP6Q8NFX7 210 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 OR4X1Q8NH49 305 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 Q9H521 79 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
TRAPPC3-201ENST00000373159 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 IGKV1-5P01602 117 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 AMBPP02760 352 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 P0C879 139 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 RNASE2P10153 161 aaKnown RBP9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 P2RY1P47900 373 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 PPP5CP53041 499 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 NEDD8Q15843 81 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 MLANAQ16655 118 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 IZUMO4Q1ZYL8 232 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 KCTD21Q4G0X4 260 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 ACTL10Q5JWF8 245 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 FNDC4Q9H6D8 234 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 SCPEP1Q9HB40 452 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 MUC4Q99102 2169 aa9.43□□□□□ -0.9
TRAPPC3-201ENST00000373159 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 SCGB2A1O75556 95 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 IFNA17P01571 189 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 IGKV1-17P01599 117 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 P0DMU3 169 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 TGFBR1P36897 503 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 RND3P61587 244 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 SLC35G3Q8N808 338 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 NARS2Q96I59 477 aaKnown RBP9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 U3KQE9 123 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 PKD1P98161 4303 aa9.42□□□□□ -0.9
TRAPPC3-201ENST00000373159 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 HELTA6NFD8 242 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 RTL8CO15255 209 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 ATG12O94817 140 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 ETV6P41212 452 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 EIF2B2P49770 351 aaKnown RBP9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 DHRS2Q13268 280 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
TRAPPC3-201ENST00000373159 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 NPY1RP25929 384 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 RCVRNP35243 200 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 OPRK1P41145 380 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 LGALS9BQ3B8N2 356 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 BSXQ3C1V8 233 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 PDCD10Q9BUL8 212 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 SEPSECSQ9HD40 501 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-201ENST00000373159 APOA1P02647 267 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 PGAM2P15259 253 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 AKR1C2P52895 323 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 PIGPP57054 158 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 TIGITQ495A1 244 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 ZNF767PQ75MW2 155 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 Q8WTZ3 238 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 TP53RKQ96S44 253 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 ENY2Q9NPA8 101 aa9.39□□□□□ -0.91
TRAPPC3-201ENST00000373159 C3orf85A0A1B0GTC6 90 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 M0QYG6 137 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 HNRNPCP07910 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 PI3P19957 117 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 HOXA1P49639 335 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 YPEL3P61236 119 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 AARDQ4LEZ3 155 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 LHFPL1Q86WI0 220 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 YIPF6Q96EC8 236 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 NEU1Q99519 415 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 COMMD3Q9UBI1 195 aa9.38□□□□□ -0.91
TRAPPC3-201ENST00000373159 RPS10-NUDT3A0A1W2PQS6 291 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms