RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SCARB1Q8WTV0 552 aa12.32□□□□□ -0.44
TMEM53-204ENST00000372243 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 CXCL2P19875 107 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 FCGR2BP31994 310 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 MLANAQ16655 118 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 LGALSLQ3ZCW2 172 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 LILRB2Q8N423 598 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 TMEM116Q8NCL8 245 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 BSCL2Q96G97 398 aaPredicted RBP12.31□□□□□ -0.44
TMEM53-204ENST00000372243 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 TXN2Q99757 166 aa12.31□□□□□ -0.44
TMEM53-204ENST00000372243 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 HAX1O00165 279 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 TAAR5O14804 337 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 DFFBO76075 338 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
TMEM53-204ENST00000372243 GAMTQ14353 236 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 TCTEX1D4Q5JR98 221 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
TMEM53-204ENST00000372243 MFAP4P55083 255 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 DEFA5Q01523 94 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 ATP5SQ99766 215 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 UQCC1Q9NVA1 299 aa12.3□□□□□ -0.44
TMEM53-204ENST00000372243 GAR1Q9NY12 217 aaKnown RBP12.3□□□□□ -0.44
TMEM53-204ENST00000372243 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 BOLA2-SMG1P6H3BVE0 249 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
TMEM53-204ENST00000372243 NPBWR1P48145 328 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 CLINT1Q14677 625 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 ZNF343Q6P1L6 599 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 ACSM6Q6P461 480 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
TMEM53-204ENST00000372243 CLN5O75503 358 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 RND2P52198 227 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 ZNF266Q14584 549 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 LAMTOR1Q6IAA8 161 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 ARPC5LQ9BPX5 153 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 SMIM3Q9BZL3 60 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 ARL6Q9H0F7 186 aa12.28□□□□□ -0.44
TMEM53-204ENST00000372243 MRPL36Q9P0J6 103 aaKnown RBP12.28□□□□□ -0.44
TMEM53-204ENST00000372243 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 KANTRA0A1W2PQU2 76 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 F8W735 103 aaPredicted RBP12.27□□□□□ -0.44
TMEM53-204ENST00000372243 IGHV3-48P01763 117 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 NKX2-5P52952 324 aaPredicted RBP12.27□□□□□ -0.44
TMEM53-204ENST00000372243 AKR1C1Q04828 323 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 THAP8Q8NA92 274 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 TMEM158Q8WZ71 300 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 NPIPB3Q92617 1050 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 ACY3Q96HD9 319 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 CCDC140Q96MF4 163 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 C19orf24Q9BVV8 132 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 PARD6GQ9BYG4 376 aaPredicted RBP12.27□□□□□ -0.44
TMEM53-204ENST00000372243 WFDC1Q9HC57 220 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.44
TMEM53-204ENST00000372243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.26□□□□□ -0.45
TMEM53-204ENST00000372243 SMCO3A2RU48 225 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 BCL2L11O43521 198 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 CD28P10747 220 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 C4BPBP20851 252 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 TEPPQ6URK8 271 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
TMEM53-204ENST00000372243 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
TMEM53-204ENST00000372243 S4R3C0 116 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 GNG7O60262 68 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 MPDU1O75352 247 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 SCGB2A1O75556 95 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 JTBO76095 146 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 IFNA5P01569 189 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 LGALS1P09382 135 aaKnown RBP12.26□□□□□ -0.45
TMEM53-204ENST00000372243 RUNX1Q01196 453 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 Q56UQ5 140 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 WDR61Q9GZS3 305 aaKnown RBP12.26□□□□□ -0.45
TMEM53-204ENST00000372243 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
TMEM53-204ENST00000372243 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
TMEM53-204ENST00000372243 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
TMEM53-204ENST00000372243 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
TMEM53-204ENST00000372243 IGHV3-11P01762 117 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms