RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 IAPPP10997 89 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 CRIP2P52943 208 aaPredicted RBP6.95□□□□□ -1.3
SNX27-201ENST00000368838 SSBP2P81877 361 aaPredicted RBP6.95□□□□□ -1.3
SNX27-201ENST00000368838 SLC38A11Q08AI6 406 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 ARL16Q0P5N6 197 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 KLRD1Q13241 179 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 SSX2Q16385 188 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 TOR2AQ5JU69 321 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 ALKAL2Q6UX46 152 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 Q8N1Y9 231 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 COMMD1Q8N668 190 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 OR1P1Q8NH06 330 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 RITA1Q96K30 269 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 NPVFQ9HCQ7 196 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 KCNIP2Q9NS61 270 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 KIAA1456Q9P272 454 aa6.95□□□□□ -1.3
SNX27-201ENST00000368838 METTL1Q9UBP6 276 aaKnown RBP6.95□□□□□ -1.3
SNX27-201ENST00000368838 BTBD17A6NE02 478 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 ACTL6BO94805 426 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 TSPAN15O95858 294 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 IFNA10P01566 189 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 MBP02144 154 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 FBP1P09467 338 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 S100A1P23297 94 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 ATP6V0CP27449 155 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 SNCAP37840 140 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 RPL27AP46776 148 aaKnown RBP6.94□□□□□ -1.3
SNX27-201ENST00000368838 HOXA1P49639 335 aaPredicted RBP6.94□□□□□ -1.3
SNX27-201ENST00000368838 CD69Q07108 199 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 CT83Q5H943 113 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 ETFRF1Q6IPR1 90 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 DYNAPQ8N1N2 210 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 PIFOQ8TCI5 191 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 BSCL2Q96G97 398 aaPredicted RBP6.94□□□□□ -1.3
SNX27-201ENST00000368838 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 SMDT1Q9H4I9 107 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 PITPNC1Q9UKF7 332 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
SNX27-201ENST00000368838 A0A1B0GW64 132 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 RAB19A4D1S5 217 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 TEX22C9J3V5 150 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 H3BP45 60 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 NDUFA7O95182 113 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 CA2P00918 260 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
SNX27-201ENST00000368838 PAX6P26367 422 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 FCGR2BP31994 310 aaPredicted RBP6.93□□□□□ -1.3
SNX27-201ENST00000368838 WT1-ASQ06250 92 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 MMDQ15546 238 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 IQCF2Q8IXL9 164 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 TMEM217Q8N7C4 229 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 Q8N9W7 124 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 TMEM116Q8NCL8 245 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 LINC01006Q8NI28 216 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 SCGB1C1Q8TD33 95 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 TMED6Q8WW62 240 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 SSMEM1Q8WWF3 244 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
SNX27-201ENST00000368838 FAM210AQ96ND0 272 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
SNX27-201ENST00000368838 CITED1Q99966 193 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 FBXO7Q9Y3I1 522 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 HILPDAQ9Y5L2 63 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 F11RQ9Y624 299 aaKnown RBP6.93□□□□□ -1.3
SNX27-201ENST00000368838 X6R8D5 127 aa6.93□□□□□ -1.3
SNX27-201ENST00000368838 IGHV3-72A0A0B4J1Y9 119 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 E7EUB6 86 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 CTRB1P17538 263 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 OPRK1P41145 380 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 IER3P46695 156 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 RPL29P47914 159 aaKnown RBP6.92□□□□□ -1.3
SNX27-201ENST00000368838 CLINT1Q14677 625 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 PXDC1Q5TGL8 231 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 CTRB2Q6GPI1 263 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 UQCC3Q6UW78 93 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 IL34Q6ZMJ4 242 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 Q6ZSV7 163 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 TTC9CQ8N5M4 171 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 TMEM86BQ8N661 226 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 LFNGQ8NES3 379 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 FAM110DQ8TAY7 271 aaPredicted RBP6.92□□□□□ -1.3
SNX27-201ENST00000368838 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 P2RX4Q99571 388 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 SMIM3Q9BZL3 60 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 FBXL15Q9H469 300 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 FAM96BQ9Y3D0 163 aa6.92□□□□□ -1.3
SNX27-201ENST00000368838 A0A1B0GUS0 222 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 M0QZ24 198 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 CYB5BO43169 146 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 NXPH3O95157 252 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 IFNA4P05014 189 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 TMEM11P17152 192 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 PROK1P58294 105 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms