RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FBLN7Q53RD9 439 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 Q8TCH9 128 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 P2RX4Q99571 388 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 DERL1Q9BUN8 251 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 K7EP13 123 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 RAB29O14966 203 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 NDUFB3O43676 98 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 HYPMO75409 117 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 ERVK-16P61578 105 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 DIAPH2-AS1Q14236 149 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 CT45A1Q5HYN5 189 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 CT45A3Q8NHU0 189 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
TPM3-212ENST00000368533 NPCDR1Q9BY65 106 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 FBN2P35556 2912 aa8.69□□□□□ -1.02
TPM3-212ENST00000368533 DIRC3C9JPN6 131 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 SPINK4O60575 86 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 TMEM200BQ69YZ2 307 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 BAGE3Q86Y29 109 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 AGMATQ9BSE5 352 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 TMEM204Q9BSN7 226 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 KBTBD11-OT1A0A1B0GTJ5 212 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 OR9G9P0C7N8 305 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 CDC34P49427 236 aaPredicted RBP8.68□□□□□ -1.02
TPM3-212ENST00000368533 THBS3P49746 956 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 TPPP2P59282 170 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 PDLIM3Q53GG5 364 aaPredicted RBP8.68□□□□□ -1.02
TPM3-212ENST00000368533 TEX36Q5VZQ5 186 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 NUDT11Q96G61 164 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 PXMP4Q9Y6I8 212 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 COX11Q9Y6N1 276 aa8.68□□□□□ -1.02
TPM3-212ENST00000368533 WNT2P09544 360 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 PSG1P11464 419 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 SUMO1P63165 101 aaKnown RBP8.67□□□□□ -1.02
TPM3-212ENST00000368533 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 ZNF738Q8NE65 137 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 C11orf94C9JXX5 98 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 F6UZH7 168 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 ADH4P08319 380 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
TPM3-212ENST00000368533 PMCHP20382 165 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 COL8A1P27658 744 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 CD1BP29016 333 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 EFNB3Q15768 340 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 S1PR3Q99500 378 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 GSX1Q9H4S2 264 aaPredicted RBP8.67□□□□□ -1.02
TPM3-212ENST00000368533 TIMM9Q9Y5J7 89 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 IGHV3-72A0A0B4J1Y9 119 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 NPPCP23582 126 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 COX7A1P24310 79 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 KIAA1644Q3SXP7 199 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 LCN12Q6JVE5 192 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 ABHD12Q8N2K0 398 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
TPM3-212ENST00000368533 MYOD1P15172 320 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 SSMEM1Q8WWF3 244 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.66□□□□□ -1.028e-7■■■■□ 20.9
TPM3-212ENST00000368533 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 IGLC2P0DOY2 106 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 CRISP2P16562 243 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
TPM3-212ENST00000368533 RANP62826 216 aaKnown RBP8.66□□□□□ -1.02
TPM3-212ENST00000368533 KCNIP4Q6PIL6 250 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 ST6GALNAC6Q969X2 333 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 NEIL1Q96FI4 390 aaPredicted RBP8.66□□□□□ -1.02
TPM3-212ENST00000368533 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 CLUHP3Q96NS8 147 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
TPM3-212ENST00000368533 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
TPM3-212ENST00000368533 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 ZNF596Q8TC21 504 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 RNF2Q99496 336 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 RAB1BQ9H0U4 201 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 IDI2-AS1Q9NZ38 188 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 CCDC168Q8NDH2 2452 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 TENM4Q6N022 2769 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 C15orf62A8K5M9 175 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 RRHO14718 337 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
TPM3-212ENST00000368533 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 Q8N976 141 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 JPT1Q9UK76 154 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 SLC45A2Q9UMX9 530 aa8.65□□□□□ -1.02
TPM3-212ENST00000368533 ANKRD17O75179 2603 aaKnown RBP8.65□□□□□ -1.03
TPM3-212ENST00000368533 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms