RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ACOT6Q3I5F7 207 aaPredicted RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 OR8G2PQ6IF36 304 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 VSTM2AQ8TAG5 236 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 IMMP2LQ96T52 175 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 LPAR2Q9HBW0 351 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 FOXA2Q9Y261 457 aaPredicted RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 TBL2Q9Y4P3 447 aaKnown RBP9.72□□□□□ -0.85
USF1-203ENST00000368021 CUBNO60494 3623 aa9.72□□□□□ -0.85
USF1-203ENST00000368021 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.85
USF1-203ENST00000368021 NF1P21359 2839 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 B4DSR2 109 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 MSMBP08118 114 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 TRGC1P0CF51 173 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 SAA1P0DJI8 122 aaPredicted RBP9.71□□□□□ -0.85
USF1-203ENST00000368021 TMEM249Q2WGJ8 235 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.85
USF1-203ENST00000368021 TMEM252Q8N6L7 170 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 OR1P1Q8NH06 330 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 OR4A5Q8NH83 315 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 RNF5Q99942 180 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 QTRT1Q9BXR0 403 aaKnown RBP9.71□□□□□ -0.85
USF1-203ENST00000368021 ARV1Q9H2C2 271 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 RBKSQ9H477 322 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 PRNDQ9UKY0 176 aa9.71□□□□□ -0.85
USF1-203ENST00000368021 HIVEP2P31629 2446 aa9.71□□□□□ -0.86
USF1-203ENST00000368021 TRAV3A0A0B4J244 114 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 FAM24AA6NFZ4 105 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 CLDN34H7C241 214 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 UPK2O00526 184 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 TAGLN2P37802 199 aaKnown RBP9.7□□□□□ -0.86
USF1-203ENST00000368021 LGALS4P56470 323 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 RPS16P62249 146 aaKnown RBP9.7□□□□□ -0.86
USF1-203ENST00000368021 EWSR1Q01844 656 aaKnown RBP eCLIP9.7□□□□□ -0.86
USF1-203ENST00000368021 LOXL1Q08397 574 aaPredicted RBP9.7□□□□□ -0.86
USF1-203ENST00000368021 MAJINQ3KP22 176 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 MOB3BQ86TA1 216 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 NIPSNAP3BQ9BS92 247 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 ATG101Q9BSB4 218 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 HIPK2Q9H2X6 1198 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 FKBP11Q9NYL4 201 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 ZNF257Q9Y2Q1 563 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 IGSF23A1L1A6 192 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 KBTBD11O94819 623 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 IGLV2-23P01705 113 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 HSPB1P04792 205 aaKnown RBP9.7□□□□□ -0.86
USF1-203ENST00000368021 GATA3P23771 443 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 CD1BP29016 333 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 LHFPL4Q7Z7J7 247 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 FBXL17Q9UF56 701 aa9.7□□□□□ -0.86
USF1-203ENST00000368021 NSD1Q96L73 2696 aaPredicted RBP9.69□□□□□ -0.86
USF1-203ENST00000368021 IGHV3-72A0A0B4J1Y9 119 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 ZNF705GA8MUZ8 300 aaPredicted RBP9.69□□□□□ -0.86
USF1-203ENST00000368021 CYB5BO43169 146 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 IAPPP10997 89 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 BRS3P32247 399 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 HSPE1P61604 102 aaKnown RBP9.69□□□□□ -0.86
USF1-203ENST00000368021 VMA21Q3ZAQ7 101 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 TMEM167AQ8TBQ9 72 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 CFHR4Q92496 578 aa9.69□□□□□ -0.86
USF1-203ENST00000368021 TET2Q6N021 2002 aaPredicted RBP9.69□□□□□ -0.86
USF1-203ENST00000368021 TIMM23O14925 209 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 HBE1P02100 147 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 AMBPP02760 352 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 CAMLGP49069 296 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 KRTAP1-1Q07627 177 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 TMEM183BQ1AE95 376 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 TEX45Q8NA69 505 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 Q8WTZ3 238 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
USF1-203ENST00000368021 DNAJC4Q9NNZ3 241 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 TCF19Q9Y242 345 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 H3BP45 60 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 SCAF4O95104 1147 aaKnown RBP9.68□□□□□ -0.86
USF1-203ENST00000368021 VENTXO95231 258 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 TRGC2P03986 189 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 PTTG1IPP53801 180 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 UBE2G2P60604 165 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 RPL8P62917 257 aaKnown RBP9.68□□□□□ -0.86
USF1-203ENST00000368021 TMEM14EPQ6UXP3 125 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 LINC01356Q8N9X3 169 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 KIAA1456Q9P272 454 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
USF1-203ENST00000368021 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 TCF21O43680 179 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 CST7O76096 145 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 TGFAP01135 160 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 IGHV4-31P0DP07 118 aa9.67□□□□□ -0.86
USF1-203ENST00000368021 AKR1C3P42330 323 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms