RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CLINT1Q14677 625 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 TMEM91Q6ZNR0 172 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 ZNF555Q8NEP9 628 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 GLMPQ8WWB7 406 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 ANXA10Q9UJ72 324 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 TMEM50AO95807 157 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 EIF2B2P49770 351 aaKnown RBP10.12□□□□□ -0.79
VAMP4-202ENST00000367740 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 AHSA2Q719I0 299 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 NUDCD2Q8WVJ2 157 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 TMEM203Q969S6 136 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 GOLT1BQ9Y3E0 138 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 V9GY05 133 aa10.12□□□□□ -0.79
VAMP4-202ENST00000367740 EREGO14944 169 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 SNAPC5O75971 98 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 IFNA5P01569 189 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 RAB6AP20340 208 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 TMEM69Q5SWH9 247 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 AADACL3Q5VUY0 350 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 HACD4Q5VWC8 232 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 ZNF818PQ6ZRF7 136 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
VAMP4-202ENST00000367740 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 SLC35B3Q9H1N7 401 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 SEPSECSQ9HD40 501 aaKnown RBP10.11□□□□□ -0.79
VAMP4-202ENST00000367740 PRNDQ9UKY0 176 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 U3KQE9 123 aa10.11□□□□□ -0.79
VAMP4-202ENST00000367740 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 KRASP01116 189 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 PPYP01298 95 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 PTHLHP12272 177 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 FCGR2CP31995 323 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 G6PCP35575 357 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 NKX2-1P43699 371 aaPredicted RBP10.1□□□□□ -0.79
VAMP4-202ENST00000367740 HOXA1P49639 335 aaPredicted RBP10.1□□□□□ -0.79
VAMP4-202ENST00000367740 CDNFQ49AH0 187 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 LAIR2Q6ISS4 152 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 CADM3Q8N126 398 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 C7orf50Q9BRJ6 194 aaKnown RBP10.1□□□□□ -0.79
VAMP4-202ENST00000367740 SLC5A7Q9GZV3 580 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
VAMP4-202ENST00000367740 DNAH8Q96JB1 4490 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 SSX5O60225 188 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 ARL6IP5O75915 188 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 CALRP27797 417 aaKnown RBP10.09□□□□□ -0.79
VAMP4-202ENST00000367740 RANBP1P43487 201 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 AP2S1P53680 142 aaPredicted RBP10.09□□□□□ -0.79
VAMP4-202ENST00000367740 ARL6IP1Q15041 203 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
VAMP4-202ENST00000367740 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
VAMP4-202ENST00000367740 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
VAMP4-202ENST00000367740 LSM2Q9Y333 95 aaKnown RBP10.09□□□□□ -0.79
VAMP4-202ENST00000367740 METTL21EPA6NDL7 271 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 TMEM235A6NFC5 223 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 ATP5G1P05496 136 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 ATP5G3P48201 142 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 FXYD4P59646 89 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 RPS25P62851 125 aaKnown RBP10.08□□□□□ -0.8
VAMP4-202ENST00000367740 LCE3BQ5TA77 95 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 FCAMRQ8WWV6 532 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 MND1Q9BWT6 205 aa10.08□□□□□ -0.8
VAMP4-202ENST00000367740 CIB2O75838 187 aa10.07□□□□□ -0.8
VAMP4-202ENST00000367740 PRM2P04554 102 aa10.07□□□□□ -0.8
VAMP4-202ENST00000367740 F2RP25116 425 aa10.07□□□□□ -0.8
VAMP4-202ENST00000367740 OR10A3P58181 314 aa10.07□□□□□ -0.8
VAMP4-202ENST00000367740 ATG5Q9H1Y0 275 aa10.07□□□□□ -0.8
VAMP4-202ENST00000367740 CLN5O75503 358 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 RLN1P04808 185 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 GCSHP23434 173 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 LPAR6P43657 344 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 ARPC4P59998 168 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 PRCDQ00LT1 54 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 SPHARQ15513 63 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 ZNF79Q15937 498 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
VAMP4-202ENST00000367740 ZFP1Q6P2D0 407 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 TMEM17Q86X19 198 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 TMEM230Q96A57 120 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 MAGT1Q9H0U3 335 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 FKBP14Q9NWM8 211 aa10.06□□□□□ -0.8
VAMP4-202ENST00000367740 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
VAMP4-202ENST00000367740 A0A087WTM6 91 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 IGKV1-17P01599 117 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 HNRNPCP07910 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
VAMP4-202ENST00000367740 FCN2Q15485 313 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms