RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CKS2P33552 79 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 RARRES2Q99969 163 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 NYNRINQ9P2P1 1898 aaKnown RBP9.57□□□□□ -0.88
SYNE1-204ENST00000367248 MPTX1A8MV57 137 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 OOSP1A8MZH6 123 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 GATA4P43694 442 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 ANK1P16157 1881 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 OR4C46A6NHA9 309 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 TMEM200BQ69YZ2 307 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 NRGNQ92686 78 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 RNF222A6NCQ9 220 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 HERVK_113P61574 105 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 OR52E5Q8NH55 327 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 OTOGLQ3ZCN5 2332 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 GGCTO75223 188 aaKnown RBP9.57□□□□□ -0.88
SYNE1-204ENST00000367248 GCGP01275 180 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 HLA-DQA1P01909 254 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 PRCDQ00LT1 54 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 PARLQ9H300 379 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 TRAV41A0A0B4J266 112 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 TBX15Q96SF7 602 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 CUL9Q8IWT3 2517 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 FXYD7P58549 80 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
SYNE1-204ENST00000367248 TMEM183BQ1AE95 376 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 C18orf12Q96KH6 178 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 RAMP3O60896 148 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 FNDC1Q4ZHG4 1894 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-204ENST00000367248 TRAV14DV4A0A0A6YYC5 116 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 MYOD1P15172 320 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 MGAMO43451 1857 aa9.56□□□□□ -0.88
SYNE1-204ENST00000367248 GCSHP23434 173 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 H7C2G1 150 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 LHFPL1Q86WI0 220 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 MSMBP08118 114 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 CD99P14209 185 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 WT1P19544 449 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-204ENST00000367248 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 NUDT3O95989 172 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
SYNE1-204ENST00000367248 KLF17Q5JT82 389 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-204ENST00000367248 LRTM2Q8N967 370 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 PSMG4Q5JS54 123 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 C10orf55Q5SWW7 151 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 RNF144BQ7Z419 303 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 BET1LQ9NYM9 111 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 VWA8A3KMH1 1905 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 PVRIGQ6DKI7 326 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 ZNF600Q6ZNG1 722 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 PCNX2A6NKB5 2137 aa9.55□□□□□ -0.88
SYNE1-204ENST00000367248 IGKV1D-17A0A075B6S4 117 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TNFSF13O75888 250 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 CGAP01215 116 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 COQ2Q96H96 371 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 GSX1Q9H4S2 264 aaPredicted RBP9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TRAV20A0A0B4J274 112 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 GRIFINA4D1Z8 144 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 PIP4P2Q8N4L2 257 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 FAM71F2Q6NXP2 309 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 BEND2Q8NDZ0 799 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TDGF1P13385 188 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 AGAP20933 346 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 IFITM2Q01629 132 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TMEM155Q4W5P6 130 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 RNF5Q99942 180 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
SYNE1-204ENST00000367248 PIEZO1Q92508 2521 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 WISP1O95388 367 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 SAA4P35542 130 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 VAMP3Q15836 100 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 CENPWQ5EE01 88 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 FOSL1P15407 271 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 TPTE2P1Q5T6R2 138 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 MIR17HGQ75NE6 70 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
SYNE1-204ENST00000367248 NDPQ00604 133 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 H0YIZ8 118 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 WDR83OSQ9Y284 106 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 TRGV4A0A0C4DH28 118 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 C5orf52A6NGY3 159 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 M0R1W7 72 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms