RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 HIST2H2BEQ16778 126 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 HIST1H2BHQ93079 126 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 HIST1H2BNQ99877 126 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 HIST1H2BMQ99879 126 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 PTPRFP10586 1907 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 IGKV1-9A0A0C4DH69 117 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 EFEMP2O95967 443 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 PF4P02776 101 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 UMODP07911 640 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 COX5BP10606 129 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 RIPPLY3P57055 190 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 ORMDL3Q8N138 153 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 FER1L6-AS1Q8NA97 138 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 ALKBH7Q9BT30 221 aaPredicted RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 Q9H3A6 140 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 LOC390937A0A1W2PQ73 354 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 A6NNC1 897 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 ASIPP42127 132 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 LY6G6FQ5SQ64 297 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 C5orf24Q7Z6I8 188 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 GTF3AQ92664 365 aaKnown RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 NEUROG1Q92886 237 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 DUX3Q96PT4 197 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 SEMA5BQ9P283 1151 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 EVI2AP22794 236 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 CDKN1AP38936 164 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 C10orf55Q5SWW7 151 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 DMRTC2Q8IXT2 367 aaPredicted RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 OCC1Q8TAD7 63 aa8.78□□□□□ -1
SCAF8-202ENST00000367186 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
SCAF8-202ENST00000367186 BTCP35070 178 aa8.77□□□□□ -1
SCAF8-202ENST00000367186 FXYD7P58549 80 aa8.77□□□□□ -1
SCAF8-202ENST00000367186 LRTM2Q8N967 370 aa8.77□□□□□ -1
SCAF8-202ENST00000367186 KIAA1217Q5T5P2 1943 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 NPIPB13A6NJU9 1138 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1.01
SCAF8-202ENST00000367186 LEPP41159 167 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 RLFQ13129 1914 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 A0A1W2PR77 199 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 IGHV4-39P01824 125 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 GZMBP10144 247 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
SCAF8-202ENST00000367186 BSPH1Q075Z2 132 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 KBTBD11-OT1A0A1B0GTJ5 212 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 SELLP14151 372 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 ADMP35318 185 aa8.77□□□□□ -1.01
SCAF8-202ENST00000367186 ATP5LO75964 103 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 LINC01587Q99440 93 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 ZNF703Q9H7S9 590 aaPredicted RBP8.76□□□□□ -1.01
SCAF8-202ENST00000367186 PGPEP1Q9NXJ5 209 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 SCN8AQ9UQD0 1980 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 FOXG1P55316 489 aaPredicted RBP8.76□□□□□ -1.01
SCAF8-202ENST00000367186 IGLV3-21P80748 117 aaPredicted RBP8.76□□□□□ -1.01
SCAF8-202ENST00000367186 WBP1Q96G27 269 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 COQ2Q96H96 371 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 CD7P09564 240 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 CSRP3P50461 194 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 TMEM54Q969K7 222 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 NDUFAF3Q9BU61 184 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 PPP1R27Q86WC6 154 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 TUBA4BQ9H853 241 aa8.76□□□□□ -1.01
SCAF8-202ENST00000367186 CASP8AP2Q9UKL3 1982 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 PARP14Q460N5 1801 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TRAV5A0A0B4J249 113 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 B9A039 149 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 RAB9AP51151 201 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 UCNP55089 124 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 FOXL1Q12952 345 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TIMM23BQ5SRD1 257 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 PIMREGQ9BSJ6 248 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TM2D1Q9BX74 207 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 DNAH12Q6ZR08 3092 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 IGHV2OR16-5A0A0B4J2B6 119 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 OR10W1Q8NGF6 305 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 FOXD3Q9UJU5 478 aaPredicted RBP8.75□□□□□ -1.01
SCAF8-202ENST00000367186 PAPPA2Q9BXP8 1791 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 MIA3Q5JRA6 1907 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TDGF1P13385 188 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
SCAF8-202ENST00000367186 ZNF585BQ52M93 769 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 SAA2-SAA4A0A096LPE2 208 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TRAV2A0A0B4J234 112 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 SAA2P0DJI9 122 aaPredicted RBP8.75□□□□□ -1.01
SCAF8-202ENST00000367186 APOBEC3AP31941 199 aaPredicted RBP8.75□□□□□ -1.01
SCAF8-202ENST00000367186 LCN12Q6JVE5 192 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 TMEM144Q7Z5S9 345 aa8.75□□□□□ -1.01
SCAF8-202ENST00000367186 MCRIP2Q9BUT9 160 aaKnown RBP8.75□□□□□ -1.01
SCAF8-202ENST00000367186 DOCK5Q9H7D0 1870 aa8.74□□□□□ -1.01
SCAF8-202ENST00000367186 IFNL4K9M1U5 179 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms