RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TRBV9A0A0B4J1U6 114 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 SMCO3A2RU48 225 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 PSMB11A5LHX3 300 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 I3L2K1 104 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 NDUFA7O95182 113 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 BRI3O95415 125 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 IFNA5P01569 189 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 VWC2Q2TAL6 325 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 TAF15Q92804 592 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHISA4-201ENST00000362011 ZNF471Q9BX82 626 aaPredicted RBP16.11■□□□□ 0.17
SHISA4-201ENST00000362011 CYTL1Q9NRR1 136 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 FBXL7Q9UJT9 491 aa16.11■□□□□ 0.17
SHISA4-201ENST00000362011 UBE2L5PA0A1B0GUS4 154 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 K7EIM0 57 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 NDUFB8O95169 186 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 IGLV1-40P01703 118 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 IGHG4P01861 327 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 PF4V1P10720 104 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 RHOGP84095 191 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 MLANAQ16655 118 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 RPL7L1Q6DKI1 246 aaKnown RBP16.1■□□□□ 0.17
SHISA4-201ENST00000362011 MS4A10Q96PG2 267 aa16.1■□□□□ 0.17
SHISA4-201ENST00000362011 IGHV3-21A0A0B4J1V1 117 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 FAM223BA6NKX1 122 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 JTBO76095 146 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 TRGV3P03979 118 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 AKR1C1Q04828 323 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 CENPVQ7Z7K6 275 aaPredicted RBP16.09■□□□□ 0.17
SHISA4-201ENST00000362011 ZNF329Q86UD4 541 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 SLC51BQ86UW2 128 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 FAM223AQ8IWN6 122 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 NECAP1Q8NC96 275 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 SLA2Q9H6Q3 261 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 NPVFQ9HCQ7 196 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 MGAM2Q2M2H8 2515 aa16.09■□□□□ 0.17
SHISA4-201ENST00000362011 TPPP2P59282 170 aa16.08■□□□□ 0.16
SHISA4-201ENST00000362011 EIF5AP63241 154 aaKnown RBP16.08■□□□□ 0.16
SHISA4-201ENST00000362011 DEFA5Q01523 94 aa16.08■□□□□ 0.16
SHISA4-201ENST00000362011 GAMTQ14353 236 aa16.08■□□□□ 0.16
SHISA4-201ENST00000362011 ACSM6Q6P461 480 aa16.08■□□□□ 0.16
SHISA4-201ENST00000362011 PARD6GQ9BYG4 376 aaPredicted RBP16.08■□□□□ 0.16
SHISA4-201ENST00000362011 IGHV3-48P01763 117 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 TPT1P13693 172 aaKnown RBP16.07■□□□□ 0.16
SHISA4-201ENST00000362011 TEX38Q6PEX7 206 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 UBAC2Q8NBM4 344 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 OR4F5Q8NH21 305 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 SCGB1C1Q8TD33 95 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 SCARB1Q8WTV0 552 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 ACY3Q96HD9 319 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 WDR61Q9GZS3 305 aaKnown RBP16.07■□□□□ 0.16
SHISA4-201ENST00000362011 WDR83OSQ9Y284 106 aa16.07■□□□□ 0.16
SHISA4-201ENST00000362011 FGF7P21781 194 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 PSMB8P28062 276 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 RND2P52198 227 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 FOXE3Q13461 319 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 C15orf32Q32M92 178 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 TREML4Q6UXN2 200 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 TMEM144Q7Z5S9 345 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 COMMD1Q8N668 190 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 C3orf56Q8N813 242 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 STOML3Q8TAV4 291 aa16.06■□□□□ 0.16
SHISA4-201ENST00000362011 MRPL36Q9P0J6 103 aaKnown RBP16.06■□□□□ 0.16
SHISA4-201ENST00000362011 MFSD2BA6NFX1 497 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 ELANEP08246 267 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 MFAP4P55083 255 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 ATP5G2Q06055 141 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 TEPPQ6URK8 271 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 C10orf99Q6UWK7 81 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 TMEM116Q8NCL8 245 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 OR4X1Q8NH49 305 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 LINC01006Q8NI28 216 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 NPIPB3Q92617 1050 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 EEF1AKMT3Q96AZ1 226 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 USMG5Q96IX5 58 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 C21orf62Q9NYP8 219 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 S4R3C0 116 aa16.05■□□□□ 0.16
SHISA4-201ENST00000362011 MPDU1O75352 247 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 MDKP21741 143 aaPredicted RBP16.04■□□□□ 0.16
SHISA4-201ENST00000362011 RAB9AP51151 201 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 BTNL8Q6UX41 500 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 KLHDC1Q8N7A1 406 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 ST8SIA2Q92186 375 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 GINS3Q9BRX5 216 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 ARV1Q9H2C2 271 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 KLK15Q9H2R5 256 aa16.04■□□□□ 0.16
SHISA4-201ENST00000362011 A0A0G2JLM5 398 aa16.03■□□□□ 0.16
SHISA4-201ENST00000362011 NPBWR1P48145 328 aa16.03■□□□□ 0.16
SHISA4-201ENST00000362011 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
SHISA4-201ENST00000362011 THAP8Q8NA92 274 aa16.03■□□□□ 0.16
SHISA4-201ENST00000362011 TXN2Q99757 166 aa16.03■□□□□ 0.16
SHISA4-201ENST00000362011 TRBV7-1A0A0A6YYK4 115 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 IGHV3-23P01764 117 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 RUNX1Q01196 453 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 Q56UQ5 140 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 PRR31Q5SQ13 230 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 LCNL1Q6ZST4 164 aa16.02■□□□□ 0.16
SHISA4-201ENST00000362011 ZNF502Q8TBZ5 544 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms