RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
UBAP1-202ENST00000359544 CEBPDP49716 269 aaPredicted RBP12.23□□□□□ -0.45
UBAP1-202ENST00000359544 AESQ08117 197 aa12.23□□□□□ -0.45
UBAP1-202ENST00000359544 FAM214BQ7L5A3 538 aa12.23□□□□□ -0.45
UBAP1-202ENST00000359544 SSBP3Q9BWW4 388 aaPredicted RBP12.23□□□□□ -0.45
UBAP1-202ENST00000359544 PRRC2CQ9Y520 2896 aaKnown RBP12.23□□□□□ -0.45
UBAP1-202ENST00000359544 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 K7EM74 188 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 GDF1P27539 372 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 FOLR3P41439 243 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
UBAP1-202ENST00000359544 ESPL1Q14674 2120 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 FAM120AOSQ5T036 256 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 GP6Q9HCN6 339 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 DUSP13Q9UII6 198 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 ADH4P08319 380 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 FAM168AQ92567 244 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 MED13Q9UHV7 2174 aa12.22□□□□□ -0.45
UBAP1-202ENST00000359544 TLN1Q9Y490 2541 aaKnown RBP12.22□□□□□ -0.45
UBAP1-202ENST00000359544 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 ZNF503Q96F45 646 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.45
UBAP1-202ENST00000359544 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 LOC102724200A0A096LPH7 203 aaPredicted RBP12.21□□□□□ -0.45
UBAP1-202ENST00000359544 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 SPINT2O43291 252 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 GATA2P23769 480 aaPredicted RBP12.21□□□□□ -0.45
UBAP1-202ENST00000359544 GPR6P46095 362 aaPredicted RBP12.21□□□□□ -0.45
UBAP1-202ENST00000359544 CCL11P51671 97 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 TRAT1Q6PIZ9 186 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 PPP1R32Q7Z5V6 425 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 COQ2Q96H96 371 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 TMEM140Q9NV12 185 aa12.21□□□□□ -0.45
UBAP1-202ENST00000359544 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 SEC11AP67812 179 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 GABRA6Q16445 453 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 ZNF766Q5HY98 468 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 FER1L6-AS1Q8NA97 138 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 Q8TCH9 128 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 NCKAP5O14513 1909 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 DEFB108AA8MXU0 73 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 J3QW42 95 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 OR5AL1P0C617 328 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 HIST1H1EP10412 219 aaKnown RBP12.2□□□□□ -0.46
UBAP1-202ENST00000359544 GPR183P32249 361 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 PAX2Q02962 417 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 SNRNP40Q96DI7 357 aaKnown RBP12.2□□□□□ -0.46
UBAP1-202ENST00000359544 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
UBAP1-202ENST00000359544 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
UBAP1-202ENST00000359544 USF3Q68DE3 2245 aa12.2□□□□□ -0.46
UBAP1-202ENST00000359544 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 C7orf71A4D174 169 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 C15orf61A6NNL5 157 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 GRPP07492 148 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 RELNP78509 3460 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 G3V4G9 280 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 C8orf88P0DMB2 117 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 CAMPP49913 170 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 SVIPQ8NHG7 77 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 PRR7Q8TB68 274 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
UBAP1-202ENST00000359544 S1PR3Q99500 378 aa12.19□□□□□ -0.46
UBAP1-202ENST00000359544 TRAV3A0A0B4J244 114 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 A0A1B0GXF2 115 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 SMPD2O60906 423 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 LIPFP07098 398 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 OR4S2Q8NH73 311 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 AP1S3Q96PC3 154 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 AHRRA9YTQ3 701 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 SAP30O75446 220 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
UBAP1-202ENST00000359544 SARAFQ96BY9 339 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 MRPL32Q9BYC8 188 aaKnown RBP12.18□□□□□ -0.46
UBAP1-202ENST00000359544 FOXA2Q9Y261 457 aaPredicted RBP12.18□□□□□ -0.46
UBAP1-202ENST00000359544 CNTRLQ7Z7A1 2325 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 SPTA1P02549 2419 aa12.18□□□□□ -0.46
UBAP1-202ENST00000359544 A0A087X0K7 114 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 COL8A2P25067 703 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms