RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 C11orf71Q6IPW1 123 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF562Q6V9R5 426 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 GBGT1Q8N5D6 347 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 LSM10Q969L4 123 aaKnown RBP4.14□□□□□ -1.75
ATXN3-202ENST00000359366 RITA1Q96K30 269 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 OR4C12Q96R67 309 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 S1PR3Q99500 378 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 CITED1Q99966 193 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 HINT2Q9BX68 163 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 CDC42EP3Q9UKI2 254 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 APCP25054 2843 aa4.14□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1B0GW15 77 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 DUXBA0A1W2PPF3 345 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 A1L4Q6 167 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 CEBPZOSA8MTT3 80 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 RAB29O14966 203 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 PAX2Q02962 417 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 PRSS8Q16651 343 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 COX19Q49B96 90 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 GPR157Q5UAW9 335 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF66Q6ZN08 573 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF841Q6ZN19 808 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 SSX8Q7RTT4 187 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 PNKDQ8N490 385 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 OR10X1Q8NGY0 326 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ISOC2Q96AB3 205 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 RAX2Q96IS3 184 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 RSG1Q9BU20 258 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 MRPL27Q9P0M9 148 aaKnown RBP4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ONECUT1Q9UBC0 465 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 TRAV26-1A0A087WT03 109 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM8BA6NDV4 472 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 FAM157AC9JC47 383 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 JTBO76095 146 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 TSPAN13O95857 204 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 SMIM17P0DL12 118 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 APELAP0DMC3 54 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 OR13C7P0DN81 318 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 DEFA4P12838 97 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ATP6V0CP27449 155 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 RAB9AP51151 201 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 DLX6P56179 175 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 BAXQ07812 192 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 KLRD1Q13241 179 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 TEX38Q6PEX7 206 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 Q6ZRG5 221 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 SLC25A48Q6ZT89 311 aaKnown RBP4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF525Q8N782 197 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ZBTB34Q8NCN2 500 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 DDB2Q92466 427 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 PARP11Q9NR21 331 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-202ENST00000359366 ITPR2Q14571 2701 aa4.13□□□□□ -1.75
ATXN3-202ENST00000359366 BORCS7-ASMTA0A0B4J1R7 106 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TRBV7-9A0A0J9YWB2 115 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 B4DEV8 164 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR7C2O60412 319 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 IFNA5P01569 189 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 PRH1P02810 166 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR5G3P0C626 314 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV1-8P0DP01 117 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 CD24P25063 80 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 RPL23AP62750 156 aaKnown RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM155Q4W5P6 130 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR4A47Q6IF82 309 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 NIT1Q86X76 327 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 ABHD12Q8N2K0 398 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 NECAP1Q8NC96 275 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR4P4Q8NGL7 312 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR2G3Q8NGZ4 309 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR4A16Q8NH70 328 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 FAM213BQ8TBF2 198 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 CIB3Q96Q77 187 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TEX15Q9BXT5 2789 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 MEGF9Q9H1U4 602 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 VSIRQ9H7M9 311 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 YAE1D1Q9NRH1 226 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM242Q9NWH2 141 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 GCN1Q92616 2671 aaKnown RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 PPIAL4CA0A0B4J2A2 164 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 G3V4G9 280 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 J3QR06 171 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 M0QZ24 198 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TAAR5O14804 337 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 RBFOX2O43251 390 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 ENSAO43768 121 aaKnown RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TRGC1P0CF51 173 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 PPIAL4GP0DN37 164 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 ZFP36P26651 326 aaKnown RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 CNTFRP26992 372 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 CKS1BP61024 79 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 LCN2P80188 198 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 MEF2CQ06413 473 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 MSMO1Q15800 293 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 WDR25Q64LD2 544 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-202ENST00000359366 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 LYPD6BQ8NI32 183 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms