RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 DMBT1Q9UGM3 2413 aaPredicted RBP11.25□□□□□ -0.61
IFT20-202ENST00000357896 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
IFT20-202ENST00000357896 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
IFT20-202ENST00000357896 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
IFT20-202ENST00000357896 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
IFT20-202ENST00000357896 HTN3P15516 51 aa11.25□□□□□ -0.61
IFT20-202ENST00000357896 OGFRL1Q5TC84 451 aaPredicted RBP11.25□□□□□ -0.61
IFT20-202ENST00000357896 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
IFT20-202ENST00000357896 NDUFB11Q9NX14 153 aa11.25□□□□□ -0.61
IFT20-202ENST00000357896 RHBDL2Q9NX52 303 aa11.25□□□□□ -0.61
IFT20-202ENST00000357896 TRAV18A0A075B6X5 111 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 NBDYA0A0U1RRE5 68 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 H3BMM0 161 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 SNCAP37840 140 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
IFT20-202ENST00000357896 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 C22orf42Q6IC83 251 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 DHRS11Q6UWP2 260 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
IFT20-202ENST00000357896 YTHDF1Q9BYJ9 559 aaKnown RBP11.24□□□□□ -0.61
IFT20-202ENST00000357896 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
IFT20-202ENST00000357896 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
IFT20-202ENST00000357896 SMIM30A4D0T7 59 aa11.23□□□□□ -0.61
IFT20-202ENST00000357896 CBX5P45973 191 aa11.23□□□□□ -0.61
IFT20-202ENST00000357896 HOXA1P49639 335 aaPredicted RBP11.23□□□□□ -0.61
IFT20-202ENST00000357896 PPP5CP53041 499 aa11.23□□□□□ -0.61
IFT20-202ENST00000357896 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
IFT20-202ENST00000357896 FAM212BQ9NTI7 297 aaPredicted RBP11.23□□□□□ -0.61
IFT20-202ENST00000357896 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 A6NJ64 397 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 NACAE9PAV3 2078 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 CORTO00230 105 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 FCER2P06734 321 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 SUB1P53999 127 aaKnown RBP eCLIP11.22□□□□□ -0.61
IFT20-202ENST00000357896 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 EHFQ9NZC4 300 aa11.22□□□□□ -0.61
IFT20-202ENST00000357896 IGHV3OR16-12A0A075B7B8 117 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 GPR31O00270 319 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 CLN5O75503 358 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 S100GP29377 79 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 TBCEQ15813 527 aaPredicted RBP11.21□□□□□ -0.61
IFT20-202ENST00000357896 GSG1LQ6UXU4 331 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 SEC22AQ96IW7 307 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
IFT20-202ENST00000357896 U3KQE9 123 aa11.21□□□□□ -0.61
IFT20-202ENST00000357896 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 SCAND1P57086 179 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 OR4X1Q8NH49 305 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 AUNIPQ9H7T9 357 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 DIABLOQ9NR28 239 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 RRP15Q9Y3B9 282 aaKnown RBP11.2□□□□□ -0.62
IFT20-202ENST00000357896 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
IFT20-202ENST00000357896 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 RFX2P48378 723 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 DAD1P61803 113 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 SFXN4Q6P4A7 337 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 NRN1Q9NPD7 142 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 IFT46Q9NQC8 304 aa11.19□□□□□ -0.62
IFT20-202ENST00000357896 HBE1P02100 147 aa11.18□□□□□ -0.62
IFT20-202ENST00000357896 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
IFT20-202ENST00000357896 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
IFT20-202ENST00000357896 OPRK1P41145 380 aa11.18□□□□□ -0.62
IFT20-202ENST00000357896 NKX2-1P43699 371 aaPredicted RBP11.18□□□□□ -0.62
IFT20-202ENST00000357896 OR6F1Q8NGZ6 308 aa11.18□□□□□ -0.62
IFT20-202ENST00000357896 GOLT1BQ9Y3E0 138 aa11.18□□□□□ -0.62
IFT20-202ENST00000357896 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
IFT20-202ENST00000357896 IGKV1-17P01599 117 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 RPL5P46777 297 aaKnown RBP11.17□□□□□ -0.62
IFT20-202ENST00000357896 ALDH3B2P48448 385 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 CCL18P55774 89 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 LPCAT3Q6P1A2 487 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 SLC35G3Q8N808 338 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 Q8WTZ3 238 aa11.17□□□□□ -0.62
IFT20-202ENST00000357896 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
IFT20-202ENST00000357896 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 TAS2R46P59540 309 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 TIGITQ495A1 244 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 PHLDA2Q53GA4 152 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 OR5H2Q8NGV7 314 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 SLC25A38Q96DW6 304 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
IFT20-202ENST00000357896 MRPL36Q9P0J6 103 aaKnown RBP11.16□□□□□ -0.62
IFT20-202ENST00000357896 IGKV1-39P01597 117 aa11.15□□□□□ -0.62
IFT20-202ENST00000357896 PMP2P02689 132 aa11.15□□□□□ -0.62
IFT20-202ENST00000357896 IGKV1D-39P04432 117 aa11.15□□□□□ -0.62
IFT20-202ENST00000357896 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms