RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 OR1B1Q8NGR6 318 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
TRIM4-203ENST00000355947 OR2V2Q96R30 315 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 CCL13Q99616 98 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 CECR9P0C854 216 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 DHRS13Q6UX07 377 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 SPACA3Q8IXA5 215 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 CHEK1O14757 476 aa11.15□□□□□ -0.62
TRIM4-203ENST00000355947 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
TRIM4-203ENST00000355947 ZCCHC24Q8N2G6 241 aaKnown RBP11.15□□□□□ -0.62
TRIM4-203ENST00000355947 NUP35Q8NFH5 326 aa11.15□□□□□ -0.62
TRIM4-203ENST00000355947 H1FXQ92522 213 aaKnown RBP11.15□□□□□ -0.62
TRIM4-203ENST00000355947 KLF13Q9Y2Y9 288 aaPredicted RBP11.15□□□□□ -0.62
TRIM4-203ENST00000355947 ATMQ13315 3056 aa11.15□□□□□ -0.62
TRIM4-203ENST00000355947 TRAV9-2A0A087WT02 112 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 KLF3P57682 345 aaPredicted RBP11.14□□□□□ -0.63
TRIM4-203ENST00000355947 NUDT10Q8NFP7 164 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 NUDT11Q96G61 164 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 TXNDC17Q9BRA2 123 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 PAXXQ9BUH6 204 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 IGKV1D-17A0A075B6S4 117 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 PGPA6NDG6 321 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 CT45A1Q5HYN5 189 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 CT45A3Q8NHU0 189 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 TMSB15BA0A087X1C1 80 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 TRAV8-1A0A0A6YYK1 113 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 C15orf61A6NNL5 157 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 TM4SF20Q53R12 229 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 ZNF766Q5HY98 468 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 ITLN1Q8WWA0 313 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 IFI27L2Q9H2X8 130 aa11.14□□□□□ -0.63
TRIM4-203ENST00000355947 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 MMP23AO75900 390 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 AREGP15514 252 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 MUC15Q8N387 334 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 TACC2O95359 2948 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
TRIM4-203ENST00000355947 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 C9JCJ5 164 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
TRIM4-203ENST00000355947 PPOXP50336 477 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 TMEM70Q9BUB7 260 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 GSX1Q9H4S2 264 aaPredicted RBP11.13□□□□□ -0.63
TRIM4-203ENST00000355947 OSTCQ9NRP0 149 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 IDI2-AS1Q9NZ38 188 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
TRIM4-203ENST00000355947 C9orf172C9J069 976 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 PPIAL4DF5H284 164 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 CTRLP40313 264 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
TRIM4-203ENST00000355947 TRBV9A0A0B4J1U6 114 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 RBX1P62877 108 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 TBR1Q16650 682 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 CORO2AQ92828 525 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 ZNF503Q96F45 646 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 SERTM2A0A1B0GWG4 89 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 C15orf65H3BRN8 121 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 NEUROG1Q92886 237 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 SH3BGRL2Q9UJC5 107 aa11.12□□□□□ -0.63
TRIM4-203ENST00000355947 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
TRIM4-203ENST00000355947 ZNF891A8MT65 544 aaPredicted RBP11.11□□□□□ -0.63
TRIM4-203ENST00000355947 NTN3O00634 580 aaPredicted RBP11.11□□□□□ -0.63
TRIM4-203ENST00000355947 TNFSF15O95150 251 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 DLX1P56177 255 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 TNRC6AQ8NDV7 1962 aaKnown RBP11.11□□□□□ -0.63
TRIM4-203ENST00000355947 KALRNO60229 2985 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 MGST3O14880 152 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 ADAMTS20P59510 1910 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 LOC105371242A0A075B767 164 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 CCL8P80075 99 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 ORAOV1Q8WV07 137 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
TRIM4-203ENST00000355947 ZGRF1Q86YA3 2104 aa11.1□□□□□ -0.63
TRIM4-203ENST00000355947 APC2O95996 2303 aa11.1□□□□□ -0.63
TRIM4-203ENST00000355947 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
TRIM4-203ENST00000355947 PEX7O00628 323 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 816 ms