RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PSMG4Q5JS54 123 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 DHRS13Q6UX07 377 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 DEFB119Q8N690 84 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 RAB37Q96AX2 223 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 ZNF747Q9BV97 191 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 HILPDAQ9Y5L2 63 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 H0Y8G0 127 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 TMEM164Q5U3C3 297 aa15.15■□□□□ 0.02
SMPD1-201ENST00000342245 PEX7O00628 323 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 SNAI2O43623 268 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 BLNKQ8WV28 456 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 SLC25A33Q9BSK2 321 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 RPP21Q9H633 154 aaKnown RBP15.14■□□□□ 0.01
SMPD1-201ENST00000342245 SPANXB1Q9NS25 103 aaPredicted RBP15.14■□□□□ 0.01
SMPD1-201ENST00000342245 BOKQ9UMX3 212 aaPredicted RBP15.14■□□□□ 0.01
SMPD1-201ENST00000342245 SELENOKQ9Y6D0 94 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 CHEK1O14757 476 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 TSPAN13O95857 204 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 KIR2DS2P43631 304 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 C7orf69Q9H7B7 122 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 MRPL16Q9NX20 251 aaKnown RBP15.14■□□□□ 0.01
SMPD1-201ENST00000342245 R4GN57 208 aa15.14■□□□□ 0.01
SMPD1-201ENST00000342245 OR11H12B2RN74 326 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 IGLV3-19P01714 112 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 IGHV3-7P01780 117 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 LTBRP36941 435 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 LTC4SQ16873 150 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 OR11H1Q8NG94 326 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 OR11H2Q8NH07 326 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 VCANP13611 3396 aa15.13■□□□□ 0.01
SMPD1-201ENST00000342245 VWC2LB2RUY7 222 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 FCGR3BO75015 233 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 ATP5IP56385 69 aaPredicted RBP15.12■□□□□ 0.01
SMPD1-201ENST00000342245 LGALS9BQ3B8N2 356 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 LGALS9CQ6DKI2 356 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 Q6ZR03 302 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 AP5S1Q9NUS5 200 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 UBE2L3P68036 154 aaKnown RBP15.12■□□□□ 0.01
SMPD1-201ENST00000342245 ZADH2Q8N4Q0 377 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 GCSAMQ8N6F7 178 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 OR10D3Q8NH80 312 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 NEU4Q8WWR8 484 aaPredicted RBP15.12■□□□□ 0.01
SMPD1-201ENST00000342245 TMUB1Q9BVT8 246 aa15.12■□□□□ 0.01
SMPD1-201ENST00000342245 LMO7DNF2Z398 122 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 KIR2DL2P43627 348 aaPredicted RBP15.11■□□□□ 0.01
SMPD1-201ENST00000342245 FOXF2Q12947 444 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 RBPMS2Q6ZRY4 209 aaKnown RBP15.11■□□□□ 0.01
SMPD1-201ENST00000342245 NANOS1Q8WY41 292 aaKnown RBP15.11■□□□□ 0.01
SMPD1-201ENST00000342245 ABHD17AQ96GS6 310 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 CEP290O15078 2479 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 DEFB133Q30KQ1 61 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 ZNF492Q9P255 531 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 ZNF407Q9C0G0 2248 aa15.11■□□□□ 0.01
SMPD1-201ENST00000342245 SPAARA0A1B0GVQ0 90 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-201ENST00000342245 KLF7O75840 302 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-201ENST00000342245 CFHR1Q03591 330 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 MCRIP2Q9BUT9 160 aaKnown RBP15.1■□□□□ 0.01
SMPD1-201ENST00000342245 C15orf61A6NNL5 157 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 ZNF329Q86UD4 541 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 PRSS22Q9GZN4 317 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 TMEM140Q9NV12 185 aa15.1■□□□□ 0.01
SMPD1-201ENST00000342245 CCL2P13500 99 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 HSPE1P61604 102 aaKnown RBP15.09■□□□□ 0.01
SMPD1-201ENST00000342245 PLP2Q04941 152 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 GGNQ86UU5 652 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 FOXA2Q9Y261 457 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-201ENST00000342245 CXCL13O43927 109 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 CT45A10P0DMU9 189 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 CCL3P10147 92 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 B3GALT5-AS1P59052 145 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 GTSF1Q8WW33 167 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 LINC00479Q96M42 142 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 PROK2Q9HC23 129 aa15.09■□□□□ 0.01
SMPD1-201ENST00000342245 MGST3O14880 152 aa15.08■□□□□ 0.01
SMPD1-201ENST00000342245 ZNF418Q8TF45 676 aaPredicted RBP15.08■□□□□ 0.01
SMPD1-201ENST00000342245 HAX1O00165 279 aa15.08■□□□□ 0
SMPD1-201ENST00000342245 CER1O95813 267 aa15.08■□□□□ 0
SMPD1-201ENST00000342245 RPRMLQ8N4K4 120 aa15.08■□□□□ 0
SMPD1-201ENST00000342245 PRRG4Q9BZD6 226 aa15.08■□□□□ 0
SMPD1-201ENST00000342245 HIGD1BQ9P298 99 aa15.08■□□□□ 0
SMPD1-201ENST00000342245 TRIOO75962 3097 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 KLRC4-KLRK1H3BQV0 150 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 P01737 135 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 FAM167A-AS1Q96KT0 104 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 GPR82Q96P67 336 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 SLC25A2Q9BXI2 301 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 BRWD1Q9NSI6 2320 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 SPINT2O43291 252 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 MRPL33O75394 65 aaKnown RBP15.07■□□□□ 0
SMPD1-201ENST00000342245 ZNF479Q96JC4 524 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 S1PR3Q99500 378 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 SPAG8Q99932 426 aaPredicted RBP15.07■□□□□ 0
SMPD1-201ENST00000342245 MED12Q93074 2177 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 SPEGQ15772 3267 aa15.07■□□□□ 0
SMPD1-201ENST00000342245 FCGR2BP31994 310 aaPredicted RBP15.06■□□□□ 0
SMPD1-201ENST00000342245 PGLYRP4Q96LB8 373 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 PGPEP1Q9NXJ5 209 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 MYO15AQ9UKN7 3530 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 KLF12Q9Y4X4 402 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms