RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CTRB2Q6GPI1 263 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 OR5T1Q8NG75 326 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 OR5R1Q8NH85 324 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 OR2T6Q8NHC8 308 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 PLA2G2EQ9NZK7 142 aa13.71□□□□□ -0.22
CLDN4-201ENST00000340958 IGHV3-21A0A0B4J1V1 117 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 INAFM1C9JVW0 142 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 ATP6V0E1O15342 81 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 TSPAN9O75954 239 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 IER3P46695 156 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 C16orf82Q7Z2V1 217 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 HRH4Q9H3N8 390 aa13.7□□□□□ -0.22
CLDN4-201ENST00000340958 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 TEX46H3BTG2 121 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 TSPAN4O14817 238 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 MT-CO2P00403 227 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 HNF1AP20823 631 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 FHITP49789 147 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 MFAP2P55001 183 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 FFAR4Q5NUL3 377 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 TMEM144Q7Z5S9 345 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 KCNIP2Q9NS61 270 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 ZNF355PQ9NSJ1 428 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 NPIPB3Q92617 1050 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 MGST2Q99735 147 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-201ENST00000340958 THYN1Q9P016 225 aa13.69□□□□□ -0.22
CLDN4-201ENST00000340958 AGPAT2O15120 278 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 MBP02144 154 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 CRYGCP07315 174 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 ATF4P18848 351 aaPredicted RBP13.68□□□□□ -0.22
CLDN4-201ENST00000340958 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
CLDN4-201ENST00000340958 TMEM41BQ5BJD5 291 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 ASPHD1Q5U4P2 390 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 DPPA3Q6W0C5 159 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 Q6YL49 198 aa13.68□□□□□ -0.22
CLDN4-201ENST00000340958 ZFP92A6NM28 416 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 EGR2P11161 476 aaPredicted RBP13.67□□□□□ -0.22
CLDN4-201ENST00000340958 RND2P52198 227 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 RBMS3Q6XE24 437 aaKnown RBP13.67□□□□□ -0.22
CLDN4-201ENST00000340958 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 LSM4Q9Y4Z0 139 aaKnown RBP13.67□□□□□ -0.22
CLDN4-201ENST00000340958 NAV3Q8IVL0 2385 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 A0A1B0GV50 99 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 LINC01548A6NM66 108 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 TSPAN15O95858 294 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 AMY1AP04745 511 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 ACOT6Q3I5F7 207 aaPredicted RBP13.67□□□□□ -0.22
CLDN4-201ENST00000340958 ACSM6Q6P461 480 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 SLC35E3Q7Z769 313 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 CENPVQ7Z7K6 275 aaPredicted RBP13.67□□□□□ -0.22
CLDN4-201ENST00000340958 VSIRQ9H7M9 311 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 PXMP4Q9Y6I8 212 aa13.67□□□□□ -0.22
CLDN4-201ENST00000340958 CUBNO60494 3623 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 HOXA3O43365 443 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-201ENST00000340958 SOX15O60248 233 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 H2AFB1P0C5Y9 115 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 OR10J1P30954 320 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 RAB2AP61019 212 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 B2MP61769 119 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 MIC13Q5XKP0 118 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 PVRIGQ6DKI7 326 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 OR10G4Q8NGN3 311 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 OR10G9Q8NGN4 311 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 OR10G7Q8NGN6 311 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 ZNF48Q96MX3 618 aaPredicted RBP13.66□□□□□ -0.22
CLDN4-201ENST00000340958 GGTLC1Q9BX51 225 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 PRELID1Q9Y255 219 aa13.66□□□□□ -0.22
CLDN4-201ENST00000340958 G3V318 75 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 BLCAPP62952 87 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 AKIRIN2Q53H80 203 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 SIGLECL1Q8N7X8 197 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 SFT2D1Q8WV19 159 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 DMRT1Q9Y5R6 373 aa13.65□□□□□ -0.22
CLDN4-201ENST00000340958 TRAV41A0A0B4J266 112 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 FAM122CQ6P4D5 195 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 ATRAIDQ6UW56 229 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 STPG3Q8N7X2 389 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 BPIFCQ8NFQ6 507 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-201ENST00000340958 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
CLDN4-201ENST00000340958 HIST1H1BP16401 226 aaKnown RBP13.64□□□□□ -0.23
CLDN4-201ENST00000340958 IGLV11-55A0A075B6I3 123 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 I3L2K1 104 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 OR2J3O76001 311 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 APOC3P02656 99 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
CLDN4-201ENST00000340958 MARC2Q969Z3 335 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 ACTR3CQ9C0K3 210 aaPredicted RBP13.63□□□□□ -0.23
CLDN4-201ENST00000340958 SLC39A9Q9NUM3 307 aa13.63□□□□□ -0.23
CLDN4-201ENST00000340958 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 A0A1W2PPV4 95 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-201ENST00000340958 IGHG2P01859 326 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 SCGB2A2Q13296 93 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms