RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 STAG3L3P0CL85 134 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 CYB5R2Q6BCY4 276 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 SPSB3Q6PJ21 355 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 IGF2-ASQ6U949 168 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 BDP1A6H8Y1 2624 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 IGHV3OR16-10A0A075B7F0 116 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 IGKV1-16P04430 117 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 SRSF12Q8WXF0 261 aaKnown RBP5.17□□□□□ -1.58
PRKDC-202ENST00000338368 LOXL3P58215 753 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 EFNB3Q15768 340 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 PRNTQ86SH4 94 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TRAV1-1A0A0B4J248 108 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TRAV34A0A0B4J273 112 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TRAV20A0A0B4J274 112 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 COLCA2A8K830 154 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 C9JQL5 133 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 ADCYAP1P18509 176 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 ATP5J2P56134 94 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 C11orf53Q8IXP5 236 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 TEX45Q8NA69 505 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 COL8A2P25067 703 aa5.17□□□□□ -1.58
PRKDC-202ENST00000338368 A8MWL6 223 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 C2orf83Q53S99 150 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 C5orf17Q8NAS9 161 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 PF4V1P10720 104 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 RPL7P18124 248 aaKnown RBP5.16□□□□□ -1.58
PRKDC-202ENST00000338368 H0YJW9 148 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 OR2J3O76001 311 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 C1QTNF9P0C862 333 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 IL4P05112 153 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF137PP52743 207 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 CSPG4Q6UVK1 2322 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 NBR2O15453 112 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 CSN3P07498 182 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 OR1P1Q8NH06 330 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 SLC17A3O00476 420 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 CENPWQ5EE01 88 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 FOXA2Q9Y261 457 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-202ENST00000338368 ITGB1BP1O14713 200 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 LY6EQ16553 131 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 C15orf62A8K5M9 175 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 ST6GALNAC3Q8NDV1 305 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 E7EQL1 145 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 RIGQ13278 110 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 PRSS8Q16651 343 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 TMEM177Q53S58 311 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 MRPL18Q9H0U6 180 aaKnown RBP5.16□□□□□ -1.58
PRKDC-202ENST00000338368 CLEC5AQ9NY25 188 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 APCSP02743 223 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 GATA4P43694 442 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 ZNRD1Q9P1U0 126 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 LRRK2Q5S007 2527 aa5.16□□□□□ -1.58
PRKDC-202ENST00000338368 TCRBV4S1A1TA0A5B7 111 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 BMPR1BO00238 502 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 THBDP07204 575 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 HOXA5P20719 270 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 C3orf36Q3SXR2 165 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 NOTCH4Q99466 2003 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 M0R2Z0 102 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 COL25A1Q9BXS0 654 aaPredicted RBP5.15□□□□□ -1.58
PRKDC-202ENST00000338368 S4R3C0 116 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 ISLRO14498 428 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF418Q8TF45 676 aaPredicted RBP5.15□□□□□ -1.58
PRKDC-202ENST00000338368 EAF1Q96JC9 268 aaPredicted RBP5.15□□□□□ -1.58
PRKDC-202ENST00000338368 GGTLC1Q9BX51 225 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 IGHV2-26A0A0B4J1V2 119 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 KIAA1644Q3SXP7 199 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 NCOR1P1Q9H4R4 102 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 IL36BQ9NZH7 164 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 HLA-DQA1P01909 254 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 ELOBQ15370 118 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 ZNF600Q6ZNG1 722 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 GTF2H5Q6ZYL4 71 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 GBGT1Q8N5D6 347 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 TTC28Q96AY4 2481 aa5.15□□□□□ -1.58
PRKDC-202ENST00000338368 A0A1W2PRE2 83 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 C15orf65H3BRN8 121 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 LY6HO94772 140 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 DYNLRB2Q8TF09 96 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV1-3A0A0C4DH29 117 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 GATA3P23771 443 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 EFNA4P52798 201 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 TAS2R60P59551 318 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 ARL2-SNX15V9GYD0 113 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 A0A1B0GW64 132 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 MLANAQ16655 118 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 DNLZQ5SXM8 178 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 TRAV5A0A0B4J249 113 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 WNT2P09544 360 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 GOLT1AQ6ZVE7 132 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 PARD6GQ9BYG4 376 aaPredicted RBP5.15□□□□□ -1.59
PRKDC-202ENST00000338368 C21orf62Q9NYP8 219 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 RABAC1Q9UI14 185 aa5.15□□□□□ -1.59
PRKDC-202ENST00000338368 CPAMD8Q8IZJ3 1885 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 PYYP10082 97 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 UNQ6494/PRO21346Q6UXR6 183 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 CCL19Q99731 98 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM242Q9NWH2 141 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 FBXL7Q9UJT9 491 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms