RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 ZFC3H1O60293 1989 aaKnown RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 IGLV3-32A0A0A0MS00 114 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 CD5P06127 495 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 RFPL3SP0C7P2 107 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 CD28P10747 220 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 RPL32P62910 135 aaKnown RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 TRIP11Q15643 1979 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 ZNHIT1O43257 154 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 F8VVB4 439 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 F8VWA3 439 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 F8WEM9 126 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 FAM27E3Q08E93 113 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 IMMP1LQ96LU5 166 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 TMEM133Q9H2Q1 129 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 PRCDQ00LT1 54 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 SIGLEC12Q96PQ1 595 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 CEACAM1P13688 526 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 LINC00158P58513 81 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
HLCS-201ENST00000336648 IGHV1-2P23083 117 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 ZNF497Q6ZNH5 498 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 STHQ8IWL8 128 aa10.93□□□□□ -0.66
HLCS-201ENST00000336648 IGLV3-12A0A075B6K2 115 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 DTX1Q86Y01 620 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 ITGB1BP1O14713 200 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-23P01764 117 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 JPT2Q9H910 190 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 SIPA1L3O60292 1781 aaPredicted RBP10.92□□□□□ -0.66
HLCS-201ENST00000336648 SAA2-SAA4A0A096LPE2 208 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 PROB1E7EW31 1015 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 SAA2P0DJI9 122 aaPredicted RBP10.92□□□□□ -0.66
HLCS-201ENST00000336648 SCN3AQ9NY46 2000 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 TRAV14DV4A0A0A6YYC5 116 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
HLCS-201ENST00000336648 PSG8Q9UQ74 426 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 MIA3Q5JRA6 1907 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 TIAF1O95411 115 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 CT83Q5H943 113 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
HLCS-201ENST00000336648 SHISA3A0PJX4 238 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 CD7P09564 240 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 ATP1A1-AS1Q5TC04 95 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 ID3Q02535 119 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 WBP1Q96G27 269 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 LOC102723996A0A087X1L8 192 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-66A0A0C4DH42 116 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 RAMP1O60894 148 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 CTSBP07858 339 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
HLCS-201ENST00000336648 MORN2Q502X0 79 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 MRPL14Q6P1L8 145 aaKnown RBP10.91□□□□□ -0.66
HLCS-201ENST00000336648 SCN4AP35499 1836 aa10.91□□□□□ -0.66
HLCS-201ENST00000336648 OR9G9P0C7N8 305 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 KLF12Q9Y4X4 402 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 FGF16O43320 207 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 WDR83OSQ9Y284 106 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 KNTC1P50748 2209 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 DSCR9P59020 149 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 GAGE2AQ6NT46 116 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 RNF5Q99942 180 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 NCOR1P1Q9H4R4 102 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
HLCS-201ENST00000336648 UBE2V1Q13404 147 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 C8orf46Q8TAG6 207 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.66
HLCS-201ENST00000336648 IGKV1D-43A0A0B4J1Z2 117 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 A0A0G2JMM0 328 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 A0A1W2PPB8 328 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 KIR3DP1A8MWS1 328 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 NEUROG3Q9Y4Z2 214 aa10.9□□□□□ -0.67
HLCS-201ENST00000336648 ZXDCQ2QGD7 858 aaPredicted RBP10.89□□□□□ -0.67
HLCS-201ENST00000336648 RNF126Q9BV68 326 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 ZNF638Q14966 1978 aaKnown RBP10.89□□□□□ -0.67
HLCS-201ENST00000336648 OOSP1A8MZH6 123 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 GZMBP10144 247 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 A0A1B0GW64 132 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 ADARB2-AS1A8MUL3 147 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 RHOGP84095 191 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 SLC25A48Q6ZT89 311 aaKnown RBP10.89□□□□□ -0.67
HLCS-201ENST00000336648 TRACP01848 142 aa10.89□□□□□ -0.67
HLCS-201ENST00000336648 CELA3AP09093 270 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms