RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RSPO3Q9BXY4 272 aaPredicted RBP12.37□□□□□ -0.43
C9orf47-201ENST00000334490 PLXNA2O75051 1894 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 PUSL1Q8N0Z8 303 aaKnown RBP12.37□□□□□ -0.43
C9orf47-201ENST00000334490 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 TMEM250H0YL14 139 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 PRSS8Q16651 343 aa12.37□□□□□ -0.43
C9orf47-201ENST00000334490 TRAV20A0A0B4J274 112 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 RNF222A6NCQ9 220 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 AGAP20933 346 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 TMEM183BQ1AE95 376 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 SLC25A48Q6ZT89 311 aaKnown RBP12.36□□□□□ -0.43
C9orf47-201ENST00000334490 MAPK1IP1LQ8NDC0 245 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 NDUFS8O00217 210 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 CEACAM4O75871 244 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
C9orf47-201ENST00000334490 NSUN5P1Q3KNT7 163 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 RELBQ01201 579 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 HSPB8Q9UJY1 196 aa12.36□□□□□ -0.43
C9orf47-201ENST00000334490 TRGC1P0CF51 173 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 MEOX2P50222 304 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 Q5PR19 223 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 NEU1Q99519 415 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 GSX1Q9H4S2 264 aaPredicted RBP12.35□□□□□ -0.43
C9orf47-201ENST00000334490 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 HLA-DQA1P01909 254 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 ANKHD1Q8IWZ3 2542 aaKnown RBP12.35□□□□□ -0.43
C9orf47-201ENST00000334490 SCGB1C2P0DMR2 95 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 ZNF56Q15929 161 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 PSMB11A5LHX3 300 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 UBE2L6O14933 153 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 NTF4P34130 210 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 GPR82Q96P67 336 aa12.35□□□□□ -0.43
C9orf47-201ENST00000334490 SONP18583 2426 aaKnown RBP12.34□□□□□ -0.43
C9orf47-201ENST00000334490 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 PRTN3P24158 256 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 LY6G6FQ5SQ64 297 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 FAM90A9PA6NNJ1 464 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 UQCRFS1P47985 274 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 IGF2-ASQ6U949 168 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 PEX7O00628 323 aa12.34□□□□□ -0.43
C9orf47-201ENST00000334490 VAMP3Q15836 100 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 LDLRAD2Q5SZI1 272 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 H0YIZ8 118 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 GGCTO75223 188 aaKnown RBP12.33□□□□□ -0.44
C9orf47-201ENST00000334490 MSMBP08118 114 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 SAA4P35542 130 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 QRFPP83859 136 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 PAX8Q06710 450 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 C15orf32Q32M92 178 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 RNF5Q99942 180 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 YLPM1P49750 1951 aaKnown RBP12.33□□□□□ -0.44
C9orf47-201ENST00000334490 DLX1P56177 255 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 Q6ZR03 302 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 LRTM2Q8N967 370 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
C9orf47-201ENST00000334490 DCAF16Q9NXF7 216 aa12.33□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 M0R381 172 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 OR1P1Q8NH06 330 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 Q9H3A6 140 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF257Q9Y2Q1 563 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 SRD5A1P18405 259 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 H0YJW9 148 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 LHFPL5Q8TAF8 219 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 ATP5G3P48201 142 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 KLF17Q5JT82 389 aaPredicted RBP12.32□□□□□ -0.44
C9orf47-201ENST00000334490 SAMD13Q5VXD3 122 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 SFRP2Q96HF1 295 aa12.32□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF383Q8NA42 475 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 TBL2Q9Y4P3 447 aaKnown RBP12.31□□□□□ -0.44
C9orf47-201ENST00000334490 TRGC2P03986 189 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 C19orf54Q5BKX5 351 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 TCF24Q7RTU0 167 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 LINC01587Q99440 93 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 PRO1933Q9H354 126 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 CDC42EP3Q9UKI2 254 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 SCO2A0A1W2PP80 73 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 IFITM2Q01629 132 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 KIAA1644Q3SXP7 199 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF585BQ52M93 769 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms