RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 A6NED7 52 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A16PA6NEW6 464 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A9PA6NNJ1 464 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A5PA8MXJ8 464 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 PEX7O00628 323 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 HOXC4P09017 264 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A15PP0C7V4 464 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A14PP0C7W9 464 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 CDAP32320 146 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 ERCC8Q13216 396 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 ATG4DQ86TL0 474 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 DENND4CQ5VZ89 1909 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 PAPPA2Q9BXP8 1791 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM30CPA0ZSE6 113 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM231BA6NCW3 169 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 COL9A1P20849 921 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 TTTY10Q9BZA0 68 aa5.15□□□□□ -1.59
CDC42BPA-201ENST00000334218 UBR3Q6ZT12 1888 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TEX22C9J3V5 150 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC01387J3KSC0 135 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 GASTP01350 101 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 RNASE2P10153 161 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PPICP45877 212 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 VWC2Q2TAL6 325 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 C1QL3Q5VWW1 255 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q6Q795 121 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 FBXO27Q8NI29 283 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CALYQ9NYX4 217 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A0A6YYD4 124 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 MYBPHLA2RUH7 354 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRR30Q53SZ7 412 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM99Q8N816 258 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 STRCP1A6NGW2 1772 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV13-2A0A0B4J235 113 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 GYPEP15421 78 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 C6orf132Q5T0Z8 1188 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF826PQ6ZT77 177 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 SLC25A43Q8WUT9 341 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PROCRQ9UNN8 238 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 hDV102S1A0JD36 115 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CXCL3P19876 107 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 DIO3P55073 304 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF664Q8N3J9 261 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 IFI27L1Q96BM0 104 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 AGMATQ9BSE5 352 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CCL21O00585 134 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 EREGO14944 169 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 NPWQ8N729 165 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PDLIM7Q9NR12 457 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV12-3A0A0B4J271 114 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 APOHP02749 345 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 NBL1P41271 181 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZFP36L2P47974 494 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PAX8Q06710 450 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CASC2Q6XLA1 102 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM179BQ7Z7N9 219 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 RHNO1Q9BSD3 238 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CTAG2O75638 210 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 C18orf15Q96N68 181 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PYGO2Q9BRQ0 406 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 PHF7Q9BWX1 381 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM74BQ9NUR3 256 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 NUP98P52948 1817 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 CELA3AP09093 270 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 EGR1P18146 543 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 MRPS21P82921 87 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 KLF9Q13886 244 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM30BQ3MIR4 351 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 SBF1O95248 1867 aa5.14□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A1W2PRU2 124 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 YOD1Q5VVQ6 348 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SPATA31B1PQ5VZV4 182 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PTCRAQ6ISU1 281 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 RSPO2Q6UXX9 243 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 UCN2Q96RP3 112 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRO1854Q9UHT4 67 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM233B4DJY2 109 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 K7EMI3 77 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 DLL1O00548 723 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 VCYO14598 125 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 NPYP01303 97 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 CD164Q04900 197 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 MPV17L2Q567V2 206 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNRF2Q8NHG8 242 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 WDR83Q9BRX9 315 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 USP54Q70EL1 1684 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ARFGEF1Q9Y6D6 1849 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV3A0A0B4J244 114 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PPIFP30405 207 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SLAMF8Q9P0V8 285 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 IL36AQ9UHA7 158 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 TIMM10BQ9Y5J6 103 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A7PA6NKC0 464 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A22PA8MWA6 464 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A12PA8MX19 464 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM90A23PA8MXZ1 464 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 H3BSH0 61 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 BGLAPP02818 100 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 COX8AP10176 69 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms