RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ANKRD55Q3KP44 614 aa20.76■□□□□ 0.91
ATPAF1-201ENST00000329231 LGI3Q8N145 548 aa20.76■□□□□ 0.91
ATPAF1-201ENST00000329231 TM2D3Q9BRN9 247 aa20.76■□□□□ 0.91
ATPAF1-201ENST00000329231 A0A0B4J2A0 478 aa20.75■□□□□ 0.91
ATPAF1-201ENST00000329231 VAMP1P23763 118 aa20.75■□□□□ 0.91
ATPAF1-201ENST00000329231 BTCP35070 178 aa20.75■□□□□ 0.91
ATPAF1-201ENST00000329231 SHPKQ9UHJ6 478 aa20.75■□□□□ 0.91
ATPAF1-201ENST00000329231 IGHV3OR16-8A0A075B7F1 116 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 OR11H12B2RN74 326 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 PLA2G10O15496 165 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 YIF1AO95070 293 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 SULT1A3P0DMM9 295 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 SULT1A4P0DMN0 295 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 HTR2BP41595 481 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 UBE2MP61081 183 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 BSXQ3C1V8 233 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 OR52B4Q8NGK2 314 aa20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 HEYLQ9NQ87 328 aaPredicted RBP20.74■□□□□ 0.91
ATPAF1-201ENST00000329231 CEBPZOSA8MTT3 80 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 LYRM1O43325 122 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 PPP1R1AQ13522 171 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 HAGHQ16775 308 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 LAMTOR1Q6IAA8 161 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 DEFB125Q8N687 156 aa20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 WDR12Q9GZL7 423 aaKnown RBP20.73■□□□□ 0.91
ATPAF1-201ENST00000329231 ZNF207O43670 478 aaKnown RBP20.72■□□□□ 0.91
ATPAF1-201ENST00000329231 SFT2D2O95562 160 aa20.72■□□□□ 0.91
ATPAF1-201ENST00000329231 OPRK1P41145 380 aa20.72■□□□□ 0.91
ATPAF1-201ENST00000329231 LYZL2Q7Z4W2 148 aa20.72■□□□□ 0.91
ATPAF1-201ENST00000329231 OR10C1Q96KK4 312 aa20.72■□□□□ 0.91
ATPAF1-201ENST00000329231 DUXBA0A1W2PPF3 345 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 ZNF846Q147U1 533 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 NMSQ5H8A3 153 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 LRTM2Q8N967 370 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 ZNF414Q96IQ9 312 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 SPAG8Q99932 426 aaPredicted RBP20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 SPATA25Q9BR10 227 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 SRD5A3Q9H8P0 318 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 FLVCR2Q9UPI3 526 aa20.71■□□□□ 0.91
ATPAF1-201ENST00000329231 SMCO1Q147U7 214 aa20.7■□□□□ 0.9
ATPAF1-201ENST00000329231 WFDC10AQ9H1F0 79 aa20.7■□□□□ 0.9
ATPAF1-201ENST00000329231 HIPK2Q9H2X6 1198 aa20.7■□□□□ 0.9
ATPAF1-201ENST00000329231 SMPXQ9UHP9 88 aa20.7■□□□□ 0.9
ATPAF1-201ENST00000329231 TSPAN4O14817 238 aa20.69■□□□□ 0.9
ATPAF1-201ENST00000329231 TMEM50AO95807 157 aa20.69■□□□□ 0.9
ATPAF1-201ENST00000329231 C2orf83Q53S99 150 aa20.69■□□□□ 0.9
ATPAF1-201ENST00000329231 LINC00322Q6ZN03 302 aaPredicted RBP20.69■□□□□ 0.9
ATPAF1-201ENST00000329231 FNDC4Q9H6D8 234 aaPredicted RBP20.69■□□□□ 0.9
ATPAF1-201ENST00000329231 TRAV14DV4A0A0A6YYC5 116 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 IGHV7-4-1A0A0J9YVY3 117 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 RPS10-NUDT3A0A1W2PQS6 291 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 SCGB2A1O75556 95 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 NXPH3O95157 252 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 ZNF600Q6ZNG1 722 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 TMEM116Q8NCL8 245 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 SLC24A4Q8NFF2 622 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 OR4X1Q8NH49 305 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 GINS3Q9BRX5 216 aa20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 HUWE1Q7Z6Z7 4374 aaKnown RBP20.68■□□□□ 0.9
ATPAF1-201ENST00000329231 CLN5O75503 358 aa20.67■□□□□ 0.9
ATPAF1-201ENST00000329231 TNFRSF9Q07011 255 aa20.67■□□□□ 0.9
ATPAF1-201ENST00000329231 NOXA1Q86UR1 476 aa20.67■□□□□ 0.9
ATPAF1-201ENST00000329231 RHPN1-AS1Q9BWJ2 59 aa20.67■□□□□ 0.9
ATPAF1-201ENST00000329231 A0A1B0GU03 582 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 C9orf170A2RU37 121 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 RBMY1BA6NDE4 496 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 RBMY1EA6NEQ0 496 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 RBMY1DP0C7P1 496 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 MLANAQ16655 118 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 TOMM20LQ6UXN7 152 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 RNASEH2CQ8TDP1 164 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 HSPB7Q9UBY9 170 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 STAB2Q8WWQ8 2551 aa20.66■□□□□ 0.9
ATPAF1-201ENST00000329231 CHEK1O14757 476 aa20.65■□□□□ 0.9
ATPAF1-201ENST00000329231 OR4E1P0C645 316 aa20.65■□□□□ 0.9
ATPAF1-201ENST00000329231 MRPL36Q9P0J6 103 aaKnown RBP20.65■□□□□ 0.9
ATPAF1-201ENST00000329231 PUS1Q9Y606 427 aaKnown RBP eCLIP20.65■□□□□ 0.9
ATPAF1-201ENST00000329231 SLC25A4P12235 298 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 ANXA7P20073 488 aaKnown RBP20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 NPY1RP25929 384 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 BMI1P35226 326 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 LYG2Q86SG7 212 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 OR1S1Q8NH92 325 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 RNF2Q99496 336 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 C20orf85Q9H1P6 137 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 TMED3Q9Y3Q3 217 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 U3KQ87 197 aa20.64■□□□□ 0.89
ATPAF1-201ENST00000329231 TRAV30A0A087WSZ9 112 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 OR4C46A6NHA9 309 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 UPK1BO75841 260 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 TCRBP04435 133 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 DHRS2Q13268 280 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 C4orf46Q504U0 113 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 ETFRF1Q6IPR1 90 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 DTD1Q8TEA8 209 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 TBC1D24Q9ULP9 559 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 TENM3Q9P273 2699 aa20.63■□□□□ 0.89
ATPAF1-201ENST00000329231 IGHV3-49A0A0A0MS15 119 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 IFNA10P01566 189 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 SLC25A6P12236 298 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms