RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ANKRD55Q3KP44 614 aa11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 RBPMS2Q6ZRY4 209 aaKnown RBP11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 NOXA1Q86UR1 476 aa11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 TMEM61Q8N0U2 210 aa11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 WDR89Q96FK6 387 aaPredicted RBP11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
TUBA3D-201ENST00000321253 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 K7EMT4 169 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 ZNF207O43670 478 aaKnown RBP11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 C2orf83Q53S99 150 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 NEURL2Q9BR09 285 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 TUBA4BQ9H853 241 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 TMED3Q9Y3Q3 217 aa11.05□□□□□ -0.64
TUBA3D-201ENST00000321253 SCAF4O95104 1147 aaKnown RBP11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 NPY1RP25929 384 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 CNPY1Q3B7I2 92 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 LINC00299Q6ZSB3 139 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 RNASEH2CQ8TDP1 164 aaKnown RBP11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 RBKSQ9H477 322 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 FNDC4Q9H6D8 234 aaPredicted RBP11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 FLVCR2Q9UPI3 526 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 DNAH9Q9NYC9 4486 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 TRAV25A0A0B4J276 109 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 A6NHS1 94 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 A8MZ25 164 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 CLN5O75503 358 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 IFNA10P01566 189 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 SLC25A6P12236 298 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 OR4X1Q8NH49 305 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 S100ZQ8WXG8 99 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 U3KQ87 197 aa11.04□□□□□ -0.64
TUBA3D-201ENST00000321253 C9orf170A2RU37 121 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 LYRM1O43325 122 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 TMEM50AO95807 157 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 HOXB5P09067 269 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 CD7P09564 240 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 SLC25A4P12235 298 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 BTCP35070 178 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 MLANAQ16655 118 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 C4orf46Q504U0 113 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 LAMTOR1Q6IAA8 161 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 ZNF600Q6ZNG1 722 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 OR52B4Q8NGK2 314 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 OR10C1Q96KK4 312 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 C19orf73Q9NVV2 129 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 U3KQK5 164 aa11.03□□□□□ -0.64
TUBA3D-201ENST00000321253 TRAV30A0A087WSZ9 112 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 TRAV14DV4A0A0A6YYC5 116 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 PITX3O75364 302 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 OR4E1P0C645 316 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 ANXA7P20073 488 aaKnown RBP11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 DHRS2Q13268 280 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 LYG2Q86SG7 212 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 TMEM116Q8NCL8 245 aa11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
TUBA3D-201ENST00000321253 IGHV7-4-1A0A0J9YVY3 117 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 FAM90A26D6RGX4 464 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 PLA2G10O15496 165 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 MED6O75586 246 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 IFNA4P05014 189 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 BMI1P35226 326 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 ATP5IP56385 69 aaPredicted RBP11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 C20orf85Q9H1P6 137 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 SMPXQ9UHP9 88 aa11.01□□□□□ -0.65
TUBA3D-201ENST00000321253 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 OR11H12B2RN74 326 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 TSPAN4O14817 238 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 IFNA21P01568 189 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 RND2P52198 227 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 PRSS54Q6PEW0 395 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 DEFB125Q8N687 156 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 ZNF414Q96IQ9 312 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 PTTG2Q9NZH5 202 aa11□□□□□ -0.65
TUBA3D-201ENST00000321253 CHEK1O14757 476 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 ADAP1O75689 374 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 IAPPP10997 89 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 OR1S2Q8NGQ3 325 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 CIB3Q96Q77 187 aaPredicted RBP10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 WFDC10AQ9H1F0 79 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 SRD5A3Q9H8P0 318 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 OR10J1P30954 320 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 RAB11AP62491 216 aa10.99□□□□□ -0.65
TUBA3D-201ENST00000321253 RPP30P78346 268 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms