RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 A0A0G2JLM5 398 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 NKX2-5P52952 324 aaPredicted RBP10.59□□□□□ -0.71
PRPF18-201ENST00000320054 TPPP2P59282 170 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 TMUB2Q71RG4 321 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 LILRB2Q8N423 598 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.59□□□□□ -0.71
PRPF18-201ENST00000320054 OR5AU1Q8NGC0 362 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 ATP6V0BQ99437 205 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 ATP5SQ99766 215 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 KLK15Q9H2R5 256 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 UQCC1Q9NVA1 299 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 RNF114Q9Y508 228 aa10.59□□□□□ -0.71
PRPF18-201ENST00000320054 ATRQ13535 2644 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 BCL2L11O43521 198 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 C4BPBP20851 252 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 MDKP21741 143 aaPredicted RBP10.58□□□□□ -0.72
PRPF18-201ENST00000320054 FCGR2BP31994 310 aaPredicted RBP10.58□□□□□ -0.72
PRPF18-201ENST00000320054 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 FOXL1Q12952 345 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 GAMTQ14353 236 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 MLANAQ16655 118 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 C15orf32Q32M92 178 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 PRIMA1Q86XR5 153 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 TMEM116Q8NCL8 245 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 OR4X2Q8NGF9 303 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 OR4X1Q8NH49 305 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 TXN2Q99757 166 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 ARL6Q9H0F7 186 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
PRPF18-201ENST00000320054 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 KANTRA0A1W2PQU2 76 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 MFAP4P55083 255 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 KIAA0141Q14154 515 aaPredicted RBP10.57□□□□□ -0.72
PRPF18-201ENST00000320054 ZNF266Q14584 549 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 CLINT1Q14677 625 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 FAM209BQ5JX69 171 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 ZNF502Q8TBZ5 544 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 WFDC12Q8WWY7 111 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
PRPF18-201ENST00000320054 WFDC1Q9HC57 220 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 GAR1Q9NY12 217 aaKnown RBP10.57□□□□□ -0.72
PRPF18-201ENST00000320054 C21orf62Q9NYP8 219 aa10.57□□□□□ -0.72
PRPF18-201ENST00000320054 BORCS7-ASMTA0A0B4J1R7 106 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 MPDU1O75352 247 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
PRPF18-201ENST00000320054 NPBWR1P48145 328 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 RND2P52198 227 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 ZNF491Q8N8L2 437 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
PRPF18-201ENST00000320054 WDR83OSQ9Y284 106 aa10.56□□□□□ -0.72
PRPF18-201ENST00000320054 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 SMCO3A2RU48 225 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 CLN5O75503 358 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 JTBO76095 146 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 IFNA5P01569 189 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 IGHV3-48P01763 117 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 DEFA5Q01523 94 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 OPCMLQ14982 345 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 TCTEX1D4Q5JR98 221 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 ZNF343Q6P1L6 599 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 LCNL1Q6ZST4 164 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 UBAC2Q8NBM4 344 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 ACY3Q96HD9 319 aa10.55□□□□□ -0.72
PRPF18-201ENST00000320054 LSM4Q9Y4Z0 139 aaKnown RBP10.55□□□□□ -0.72
PRPF18-201ENST00000320054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 UBE2L5PA0A1B0GUS4 154 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 HAX1O00165 279 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 EIF5AP63241 154 aaKnown RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 KRTAP24-1Q3LI83 254 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 RPL7L1Q6DKI1 246 aaKnown RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
PRPF18-201ENST00000320054 ARV1Q9H2C2 271 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 S4R3C0 116 aa10.54□□□□□ -0.72
PRPF18-201ENST00000320054 TENM1Q9UKZ4 2725 aa10.53□□□□□ -0.72
PRPF18-201ENST00000320054 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
PRPF18-201ENST00000320054 GNG7O60262 68 aa10.53□□□□□ -0.72
PRPF18-201ENST00000320054 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
PRPF18-201ENST00000320054 LGALS1P09382 135 aaKnown RBP10.53□□□□□ -0.72
PRPF18-201ENST00000320054 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
PRPF18-201ENST00000320054 Q56UQ5 140 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms