RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DEFA4P12838 97 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 SLC25A16P16260 332 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 MFAP2P55001 183 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 HES1Q14469 280 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
TRIM40-205ENST00000307859 CR1P17927 2039 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 FN1P02751 2386 aaKnown RBP9.44□□□□□ -0.9
TRIM40-205ENST00000307859 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 EIF3GO75821 320 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM40-205ENST00000307859 MSMBP08118 114 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 OR10J1P30954 320 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 RXFP4Q8TDU9 374 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 VAX2Q9UIW0 290 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
TRIM40-205ENST00000307859 NSD1Q96L73 2696 aaPredicted RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 IGHV1-69DA0A0B4J2H0 117 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 A0A1W2PPV4 95 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 HMGB3O15347 200 aaKnown RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 TMEM11P17152 192 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 BRS3P32247 399 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 TAGLN2P37802 199 aaKnown RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 RBMS3Q6XE24 437 aaKnown RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 MANBALQ9NQG1 85 aa9.43□□□□□ -0.9
TRIM40-205ENST00000307859 ZNF469Q96JG9 3925 aaPredicted RBP9.43□□□□□ -0.9
TRIM40-205ENST00000307859 A0A096LNT2 108 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 TSPAN9O75954 239 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CNIH1O95406 144 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 FAM106CPP0CH98 169 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CTRB1P17538 263 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 NPBWR1P48145 328 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 PSMB3P49720 205 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 FXYD3Q14802 87 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 ZNF562Q6V9R5 426 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 MBD6Q96DN6 1003 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 MRPL36Q9P0J6 103 aaKnown RBP9.42□□□□□ -0.9
TRIM40-205ENST00000307859 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
TRIM40-205ENST00000307859 APELAP0DMC3 54 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 RHOBP62745 196 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 FAM120AOSQ5T036 256 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 Q71RC1 249 aaPredicted RBP9.42□□□□□ -0.9
TRIM40-205ENST00000307859 SLC35E3Q7Z769 313 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 Q8N9W7 124 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 NPIPB3Q92617 1050 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 TMPRSS5Q9H3S3 457 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 C1RLQ9NZP8 487 aa9.42□□□□□ -0.9
TRIM40-205ENST00000307859 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 TCRBV4S1A1TA0A5B7 111 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 PSMB11A5LHX3 300 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 NCBP2LA6PVI3 153 aaKnown RBP9.41□□□□□ -0.9
TRIM40-205ENST00000307859 B4DSR2 109 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 FBP1P09467 338 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 RND2P52198 227 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 CX3CL1P78423 397 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 MEF2BQ02080 365 aaPredicted RBP9.41□□□□□ -0.9
TRIM40-205ENST00000307859 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 ABHD5Q8WTS1 349 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 ARPC1AQ92747 370 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 SMR3AQ99954 134 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 C19orf24Q9BVV8 132 aa9.41□□□□□ -0.9
TRIM40-205ENST00000307859 BEX4Q9NWD9 120 aaPredicted RBP9.41□□□□□ -0.9
TRIM40-205ENST00000307859 FLNAP21333 2647 aaKnown RBP9.41□□□□□ -0.9
TRIM40-205ENST00000307859 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 FAM74A7A6NL05 159 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 I3L2K1 104 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 CXorf1O96002 111 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 HLA-DRB1P01911 266 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 OR5G3P0C626 314 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 GATA3P23771 443 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 CD81P60033 236 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 SELENOTP62341 195 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 NDPQ00604 133 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 FAM74A3Q4VXF1 159 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 LRRC75A-AS1Q8N1F1 130 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 C22orf15Q8WYQ4 148 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms