RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TCF20Q9UGU0 1960 aaKnown RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 PQLC2LA1A4F0 135 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CDX1P47902 265 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CHRNA10Q9GZZ6 450 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 ARFGEF1Q9Y6D6 1849 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM8BA6NDV4 472 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 NAT1P18440 290 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 DEFB131AP59861 70 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 FAM74A3Q4VXF1 159 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 SPATA31B1PQ5VZV4 182 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 OSR1Q8TAX0 266 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-201ENST00000303354 NRXN2Q9P2S2 1712 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 MEF2CQ06413 473 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-201ENST00000303354 Q8TAT8 98 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 SLC25A15Q9Y619 301 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 DNAL4O96015 105 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 SERF2P84101 59 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 SMIM8Q96KF7 97 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 IGHV1-8P0DP01 117 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 C1orf100Q5SVJ3 147 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 RNF125Q96EQ8 232 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 PLSCR4Q9NRQ2 329 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 SCN5AQ14524 2016 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 A0A087WWL8 130 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 LOC102723996A0A087X1L8 192 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 A0A0A6YYD4 124 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 PMS2P5A8MQ11 134 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 MEF2BQ02080 365 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-201ENST00000303354 ATP5LO75964 103 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 CD28P10747 220 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
SCN9A-201ENST00000303354 RTBDNQ9BSG5 229 aaPredicted RBP6.43□□□□□ -1.38
SCN9A-201ENST00000303354 MYOFQ9NZM1 2061 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 KLK9Q9UKQ9 250 aa6.43□□□□□ -1.38
SCN9A-201ENST00000303354 NCR2O95944 276 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 VSIRQ9H7M9 311 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 SIPA1L3O60292 1781 aaPredicted RBP6.42□□□□□ -1.38
SCN9A-201ENST00000303354 C11orf91Q3C1V1 193 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 ST20Q9HBF5 79 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 IGKV1D-8A0A087WSZ0 117 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 PSPNO60542 156 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 TIMP3P35625 211 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 RAB9AP51151 201 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 LTBP1Q14766 1721 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 TSPAN13O95857 204 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 PAX9P55771 341 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 HBBP68871 147 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 HAPLN4Q86UW8 402 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
SCN9A-201ENST00000303354 OR5A1Q8NGJ0 315 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 RNF182Q8N6D2 247 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 PARP14Q460N5 1801 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 TRAV12-2A0A075B6T6 113 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 OR11H12B2RN74 326 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 G3V318 75 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 DSCR9P59020 149 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 ANXA2RQ3ZCQ2 193 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 ASPHD1Q5U4P2 390 aa6.42□□□□□ -1.38
SCN9A-201ENST00000303354 IGKV1-9A0A0C4DH69 117 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A10PA6NDY2 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A8PA6NJQ4 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A15PP0C7V4 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A13PP0C7W8 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A14PP0C7W9 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A24PP0C7X0 464 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 SAPCD1Q5SSQ6 148 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 MRPL32Q9BYC8 188 aaKnown RBP6.41□□□□□ -1.38
SCN9A-201ENST00000303354 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 ZNF497Q6ZNH5 498 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 OR10AG1Q8NH19 301 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 NABP1Q96AH0 204 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 PRADC1Q9BSG0 188 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 TRAV21A0A0B4J279 112 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 A6NNC1 897 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 M0R143 59 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 MSMBP08118 114 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 CIARTQ8N365 385 aaPredicted RBP6.41□□□□□ -1.38
SCN9A-201ENST00000303354 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
SCN9A-201ENST00000303354 VCX2Q9H322 139 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 OVOL3O00110 214 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 TCRAP04437 139 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 ZNF257Q9Y2Q1 563 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 IGKV1-12A0A0C4DH73 117 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 DKK1O94907 266 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 IGKV1D-12P01611 117 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 RAG2P55895 527 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 NEUROG3Q9Y4Z2 214 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 WDR90Q96KV7 1748 aa6.41□□□□□ -1.38
SCN9A-201ENST00000303354 ADAMTS7Q9UKP4 1686 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 502.8 ms